Gene Tmel_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1797 
Symbol 
ID5297715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1781355 
End bp1782713 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content32% 
IMG OID640770065 
Productprotease Do 
Protein accessionYP_001307017 
Protein GI150021663 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAAGA GATTAGGTAT ATTAATTTTA ACGGTATTGG CTATTTTTTC TTTTGGCTAT 
GTAAACCCAA ACTACGAAAG TCCTATCACA AAAGTAGTTG ATGAAGCTGC ACCTGCTGTA
GTAAAGATTG AAGCAACTGT ATATTCTACA TCGTATATTG ATCCATTCAT CGAGGAATTC
TTCAAAAGAT GGTTTGGTGA TATTCCCAAG CAATATCAGC AAAAAGGTAC TAGTTTAGGC
TCAGGTTTTA TATTTGAAAA AGAAGGTTAT ATATTAACTA ATTTTCATGT AGTTGATGGT
GCTGAAAATA TAAAAGTCAG TTTGTTAGAT GGAAAAGAAT TCAGCGCCGA ATTTATCGGT
GGAGACAAAG AACTAGATAT TGCTATACTA AAAATAGATC CAAAAAACCA GGAACTTCCC
GTTTTAGAAT TTGGTGATTC CGATAAATTA AAAATTGGTG AATGGGCAAT CGCAATAGGT
AATCCACTTG GTTTTCAACA TACCGTTACA GTTGGGGTAA TTTCGGCAAC AGGAAGAAAA
ATACCAAAAC CCGATAATGA CGGTTATTAC ACAAATCTAA TTCAAACAGA CGCTGCAATC
AACCCAGGAA ATAGCGGAGG CCCACTTTTA AATATACATG GTCAAGTTAT TGGTATTAAT
ACTGCAATTA TTGCCCCTTC AGAAGCTATG AATATAGGTT TTGCAATACC AATTAACACA
GCAAAAAGAT TTATAGATAG TATAATAAAA ACTGGTAAAG CCGAAAAAGC ATATCTTGGA
GTCTATATGC AAACAGTTAC AAAAGAACTT GCAAAAGCAT TAGGGTTAAA AACTGATAAA
GGGGTTTTTA TTTCACAAGT TATAAAAGAC TCTCCAGCTG AAAAAGCTGG TTTAAAGGAT
GGAGATGTTA TTATAGAAGT TGAAGGTCTT TCTGTAACAT CTGCAAGTGA ATTAAAATCG
ATAATCCACA ACTACACTCC CGGTTCAAAA ATAAAGATTA TAGTAAATAG AAAAGGAAAA
ATAATTAAAT TTGAAGTGAC TTTAGGTAAA TCAAAAGAAA CTGAAAAAGT AACATCAGCA
AAAGAGTTTA TGGGATTAAC TGTAAAAGAC ATTACAAATG CAGATAGAGA AGAATATCAA
ATTCCAGAAG AAATTAGTGG AGTAGTTGTA AAAAACAGCA AAATAAGTTA CATTAGTGAA
GGATATGTCA TTTTCAGAAT AGCAATCAAC GGACAAAAAT ATGAAATTAG AAATATAAAT
GATTGGAACA AAGTAATTTC AAAAATAAAC AAAGGCAATT ATGTTGCTCT CTTCTACTAC
TATAAAGGTG CTACGGGAGT ATTTTCATTT GGATATTAA
 
Protein sequence
MTKRLGILIL TVLAIFSFGY VNPNYESPIT KVVDEAAPAV VKIEATVYST SYIDPFIEEF 
FKRWFGDIPK QYQQKGTSLG SGFIFEKEGY ILTNFHVVDG AENIKVSLLD GKEFSAEFIG
GDKELDIAIL KIDPKNQELP VLEFGDSDKL KIGEWAIAIG NPLGFQHTVT VGVISATGRK
IPKPDNDGYY TNLIQTDAAI NPGNSGGPLL NIHGQVIGIN TAIIAPSEAM NIGFAIPINT
AKRFIDSIIK TGKAEKAYLG VYMQTVTKEL AKALGLKTDK GVFISQVIKD SPAEKAGLKD
GDVIIEVEGL SVTSASELKS IIHNYTPGSK IKIIVNRKGK IIKFEVTLGK SKETEKVTSA
KEFMGLTVKD ITNADREEYQ IPEEISGVVV KNSKISYISE GYVIFRIAIN GQKYEIRNIN
DWNKVISKIN KGNYVALFYY YKGATGVFSF GY