| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1796 |
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| Symbol | |
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| ID | 5297714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1780141 |
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| End bp | 1781199 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640770064 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001307016 |
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| Protein GI | 150021662 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTAG AAATGATGGT AAAAGATAAA ACTATTATAT TAACCGATGA AACACCTTTC
TATATAATGT TGAGAGATTT GTTTTATGGT GGGGAATGGC ATAATATGAA AAAAGATTTT
CCTAATTTTT TAAATGATAT TGAAGTATTG GAGTTTATTG AAAAAAATGT GACAATATTA
AGCGAAGCCT TTTACGGCCC TGTGATTTGG TCAGAGTTGG TTTCATTTTT TAATGAAAAA
GGAATTAAAC CTGAAAGTTT TGAACATGGA ACAGTTGATG GTTTGTATGA ACTTGCTATT
GAATATGCGG ATAAGGATTT GTTGGGAGAT GCGAAAAATA TTTTGGAATT TGCTATAAAA
ATTGATAGGA GTTTTGCACC TGCATATGAG TTTTTGGGTA CAATACTAAT TGAACAGGGG
AATTCAGAAG AAGGTATTAA ATTTTTAAAT AGGGCTATCG AAGTTGATCC TTGGTTAGTT
CAAGCTTATT CTACACTTGG GGAAGTTTAT TATAACAAAG GTGAGTATGA AAAGGCAATA
AATTATTGGT TGAAAGAAAT TGAGTATTCG CCAAATGATA TCTTTACTTA TTTTATGATA
GCTGATGCAT ATACTCGTTC TAAAAACTAT GAGAAAGCAA TAGAAATTTT AAATAAATTA
ATAGAGATTG ATAGTGATAA TGTAATTGCT ATGTATGAAC TTTCTCAGAT TTATAGAGAA
ATTGGAAGAA ATGAAGAAGC AGATATTGTA GAAAAAGAGA TTTTAAACTC AAAACCTAGT
GATCCAAATG GTATAGAAAT TTGGGCAAAA ATAAAAATGA AATACGGAAA ATACGATGAA
ATAGTAAAGG TTATGGAGCC AATTATTGAT GATTCTTTTG AATCATTGCA TCTTAAAGCA
TTGTTAATTG TACCTTATAT TAAATTAGGA AAGATTGAAA AAGCGAAGAA GTATTATGAA
GAATTAAAAG AAAATGATTT TTGGTACTTA TTTGGTAAAA AAGAAATTTT TGATAAATAC
CTTACAAACA AGGAGAAACA ATTGTGTGGT ATGTCTTAA
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| Protein sequence | MKVEMMVKDK TIILTDETPF YIMLRDLFYG GEWHNMKKDF PNFLNDIEVL EFIEKNVTIL
SEAFYGPVIW SELVSFFNEK GIKPESFEHG TVDGLYELAI EYADKDLLGD AKNILEFAIK
IDRSFAPAYE FLGTILIEQG NSEEGIKFLN RAIEVDPWLV QAYSTLGEVY YNKGEYEKAI
NYWLKEIEYS PNDIFTYFMI ADAYTRSKNY EKAIEILNKL IEIDSDNVIA MYELSQIYRE
IGRNEEADIV EKEILNSKPS DPNGIEIWAK IKMKYGKYDE IVKVMEPIID DSFESLHLKA
LLIVPYIKLG KIEKAKKYYE ELKENDFWYL FGKKEIFDKY LTNKEKQLCG MS
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