Gene Tmel_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1763 
Symbol 
ID5297493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1749998 
End bp1751677 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content29% 
IMG OID640770035 
Productphosphoribulokinase/uridine kinase 
Protein accessionYP_001306987 
Protein GI150021633 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.295373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TTAGACTTGA GTTTTTAGAT GATGGAAGGG TTGTTGAAGT TGAAAAAGGT 
AGTACTCTTG AAAATTTTGT GGGAGATTAT TTTAAATATT ACAAATCTCC AATTGTTGCT
GCGAAAGTAA ATAATAATAA TATTGTGGAA TTATTTAGGC CATTAAGCTA TTCAGGAAAA
GTTGTATTTT TGGATGTGAA TTCTATAGAT GGATTTAGAA TTTATCAAAG AGGTTTGTTG
TTTATTCTAA AATATGTATT AAAGAAAATA TATCCAAATC ATTTTTTGAA AGTATCACAT
AGTATTGGAA AGTCAATATA TTGTGAATTG AAAGATTTGA ACAACAACCT AAAAGTTTTA
TCAGATGAAG AAATTGAAAA TGTTAAGAGT AAGATGTTTG AAGTGATCAA CAAAAATGAA
AGATTTTTGA AAATGGAGTT TTTTAAAAGT GAAGCATTAA AACTATTTGA TAAATTGGGA
TATAGCGATA AAGTTAATTT GTTAAAATAT AGAAAGAAAA AAACAGTAAA GGTTTACAAA
TTAGATGAAC ACTTTGATTA TTTTTACGGA TATATGCCAC ATTCTACTGG TGTTTTGAAA
TATTTTGATC TGTTTAAGTA TGAAGATGGA TTTGTACTTG TTTTACCTGT TTTTAAGGAT
GGAAAAGCGA TACTTGAGTT TAAACCTATG ACTAAATTAA GTCAGGTATT TATAGAATAC
AAAAAATGGC TTGAAATTAT GAATATAGAT AGTGTAGGTG ATTTAAATAG AGTAATTGCT
AGTGGAGAAA GAAGTGTTAC CGATTTAATT ATAATGTCAG AAGCTTTGCA TGAAAAGAAA
ATAGCTTTTA TTGCAGAGGA AATAAAAAAG AAAAAGACTG TGCGTTTAGT GTTAATTGCA
GGTCCTTCTT CAAGTGGAAA GACAACTTTT TCAAAGAGAT TAATGGTTCA ATTAAGAGCA
AGTGGTTTAA GGCCTGTAAC AATTTCGTTA GATGATTATT TCGTAGATAG AGAAAAAACT
CCTGTTGATG AAAACGGAAA ACCTGACTTT GAAGCTTTAG AAGCAATAGA TGTTGAATTA
TTTAATAGAA ATTTGTTGGA TTTATTTGAG GGAAAGGAAG TTGAAATACC GAAATTTGAT
TTTACACAGG GTAAAAGAAA GAAAGGTAGA AAATTAAAAA TTGAAAAGGA TCAACCGATT
ATTGTTGAAG GAATACATGG CTTAAATCCA AAACTTACTG AACTGATTCC AGAAGAGTTA
AAGTATAAGA TCTATGCAAG TGCTTTAACA CAATTGAATT TGGATAATAC AAATAGATTG
CATACTACTG ATACAAGGTT ATTAAGGAGA ATAGTTAGAG ATAGTAAATT CCGTGGGCAT
GATGCTTTGG CTACTTTAAG AATGTGGCCA AGTGTAAGAC GGGGAGAAGA TAGAAATATT
TTTCCTTATC AGGAAAATGC AGATATTATG TTTAACAGTG CTTTAGTATA TGAAATTTCA
GTGTTAAAGA TTTTTGCAGA GCAGTTGTTA ATTGTAGTTC CAGACGATAA ACCTGAATAT
TCTGAAGTAA CTAGGTTATT GAAAATACTT GATTATTTTT TACCTATAAC AAATATCGAA
GACATTCCAA GAACTTCTTT AATTAGAGAA TTTATAGGAA GGAGTGTATT TAAATATTGA
 
Protein sequence
MEKIRLEFLD DGRVVEVEKG STLENFVGDY FKYYKSPIVA AKVNNNNIVE LFRPLSYSGK 
VVFLDVNSID GFRIYQRGLL FILKYVLKKI YPNHFLKVSH SIGKSIYCEL KDLNNNLKVL
SDEEIENVKS KMFEVINKNE RFLKMEFFKS EALKLFDKLG YSDKVNLLKY RKKKTVKVYK
LDEHFDYFYG YMPHSTGVLK YFDLFKYEDG FVLVLPVFKD GKAILEFKPM TKLSQVFIEY
KKWLEIMNID SVGDLNRVIA SGERSVTDLI IMSEALHEKK IAFIAEEIKK KKTVRLVLIA
GPSSSGKTTF SKRLMVQLRA SGLRPVTISL DDYFVDREKT PVDENGKPDF EALEAIDVEL
FNRNLLDLFE GKEVEIPKFD FTQGKRKKGR KLKIEKDQPI IVEGIHGLNP KLTELIPEEL
KYKIYASALT QLNLDNTNRL HTTDTRLLRR IVRDSKFRGH DALATLRMWP SVRRGEDRNI
FPYQENADIM FNSALVYEIS VLKIFAEQLL IVVPDDKPEY SEVTRLLKIL DYFLPITNIE
DIPRTSLIRE FIGRSVFKY