Gene Tmel_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1753 
Symbol 
ID5297098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1742269 
End bp1744125 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content33% 
IMG OID640770025 
Producttransketolase 
Protein accessionYP_001306977 
Protein GI150021623 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0021] Transketolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.599828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAAAA ATCTTGAAGA AATTGCTAGA CAATGTAGAG CAGACATCTT GACAATGACA 
ACGGTTGCAG CCTCAGGTCA TCCGGGCGGT TCCATGTCTT CAATTGATTT ACTTGTCTCA
TTGTATTCAT TTGCAAACAT TTTTCCAAAT GATCCTTGGA ATGAAAAAAG AGACAGAATA
GTTGTAAGTC ATGGTCACAT TTCTCCAGCT GTATATAGTA CTCTTGCAGC ATATGGATTC
GTTAATAGAG ATGAGGTTAT TGCAGGTTTT AGGCATCCAT CAAGTATTTT TGAAGGACAC
ATTACCAGGG GAATTCCCGG AGTAGAATGG ACCACAGGTA ATCTAGGTCA AGGGTTATCT
GCTGGTATTG GAATGGCGAT TGCTGGTAAA TTAAAAAAGG AAAATTATCA TGTTTTTGTG
GTAATGAGCG ATGGTGAAAG TGCCAAAGGC CAAGTTGCAG AAGCAAGAAG AACTGCACGA
AAATTCAATT TAGATAACTT AACAGTTATA ATTGACTATA ACGATATTCA AATAAGTGGT
AGAGCTAGCA ACATAATGTA TGTAGATCTT AGAGAGGAAT ATCAAGCTGC AGATTGGAAT
GTTATTGAAA TTGATGGACA TGATTTTGAA CAAATTATAT CTGCACTAAA AATTGCAAAA
AACGATAAAA AACCTACAGT GATAATTGCA CACACCATTA TTGGAAAAGG TGTAAGCTTT
ATGGAAGATA CTCCAAAATA TCACGGTAAA CCTTTGAGTT TAGATGAATA CGAAAAAGCA
ATAAGTGAAC TTGGGCTTTC AGTAGATATT GAAAAATACA TAAAAATGAG AGAAAAACTT
GATATTCGCG AACACAAACA ATTGAAATTA AAGTATGAAA TTAACATTGA TACTGGCAAT
CCTAAAATAT ATAGAGAAAA AACAGATAAT AGAACTGCTT TAGGAAATGC TATTGCTGAT
CTTGCTCAAC TTAACAATAA TGTCGTAGCT ATTGACTGCG ACCTTAAATC ATCAGTAAAA
TTAGACATTC TTGATAAAAT AAAACCTGAG AAATTAATTG AAATTGGTGT TCAAGAACAT
AATGCAGCAG CTCTTGCTGG TGCTTTAAGT GCTGAAGGAT TTGTAACATT CTTTGCAGAT
TTTGGAGTAT TTGGAATTGA TGAAACTTTT AATCAGCACA GATTAAACGC CATAAACAAT
ACAAATCTAA AAGTGGTTGT AACACATTGT GGCGTCGATG TCGGTGAAGA TGGAAAAACA
CATCATGCAT TAAACTATAT TTCTGCTCCA CTTGCATGGT TTGGATTCAA AGTTATTGTA
CCTGCAGATC CAAATCAAAC TGACAAAGTT GTAAGATATG TTGCTTCTCA ATATGGAAAT
TACGTTGTAG CTATGGGAAG AAGCAAGGTT TCTTCCATCA CAAAACCTGA TGGTTCTCTA
TTTTTTGATG AAAATTATGA ATTCAAGTAC GGAAAAATTG ATGTAATAAG AGATGGAGAG
GATATAGTAA TAATAACCTT AGGTTCAGTG CTACCACACG CATTAAAAGC TGTAGACGAA
CTTGCAAAAG AAGGAATTAA TGTAGGTTTA CTAAATGTTT CTTGTCCTTT TGATCTTGAT
GAAGAAGCTC TTTCAAGATA TGCAAGAAAC AAAGTAATAG TAGTCGAAGA CCACAACGTG
TACAACGGTC TTGGAACATT AATCGAATCT AAATTATTCA ATTTAAAAAT ATTACCGGAT
ATGTTTATCA AAGTAGGAAT AGATAGATTC CCTGTTTCTG GAAATAGCAA ATATCTGTTT
AATATTTACG GACTTGATAG TGAAAAAATA AAAGAAACTA TTAAAAGTAT GATATAA
 
Protein sequence
MIKNLEEIAR QCRADILTMT TVAASGHPGG SMSSIDLLVS LYSFANIFPN DPWNEKRDRI 
VVSHGHISPA VYSTLAAYGF VNRDEVIAGF RHPSSIFEGH ITRGIPGVEW TTGNLGQGLS
AGIGMAIAGK LKKENYHVFV VMSDGESAKG QVAEARRTAR KFNLDNLTVI IDYNDIQISG
RASNIMYVDL REEYQAADWN VIEIDGHDFE QIISALKIAK NDKKPTVIIA HTIIGKGVSF
MEDTPKYHGK PLSLDEYEKA ISELGLSVDI EKYIKMREKL DIREHKQLKL KYEINIDTGN
PKIYREKTDN RTALGNAIAD LAQLNNNVVA IDCDLKSSVK LDILDKIKPE KLIEIGVQEH
NAAALAGALS AEGFVTFFAD FGVFGIDETF NQHRLNAINN TNLKVVVTHC GVDVGEDGKT
HHALNYISAP LAWFGFKVIV PADPNQTDKV VRYVASQYGN YVVAMGRSKV SSITKPDGSL
FFDENYEFKY GKIDVIRDGE DIVIITLGSV LPHALKAVDE LAKEGINVGL LNVSCPFDLD
EEALSRYARN KVIVVEDHNV YNGLGTLIES KLFNLKILPD MFIKVGIDRF PVSGNSKYLF
NIYGLDSEKI KETIKSMI