Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1753 |
Symbol | |
ID | 5297098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1742269 |
End bp | 1744125 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640770025 |
Product | transketolase |
Protein accession | YP_001306977 |
Protein GI | 150021623 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.599828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAAAA ATCTTGAAGA AATTGCTAGA CAATGTAGAG CAGACATCTT GACAATGACA ACGGTTGCAG CCTCAGGTCA TCCGGGCGGT TCCATGTCTT CAATTGATTT ACTTGTCTCA TTGTATTCAT TTGCAAACAT TTTTCCAAAT GATCCTTGGA ATGAAAAAAG AGACAGAATA GTTGTAAGTC ATGGTCACAT TTCTCCAGCT GTATATAGTA CTCTTGCAGC ATATGGATTC GTTAATAGAG ATGAGGTTAT TGCAGGTTTT AGGCATCCAT CAAGTATTTT TGAAGGACAC ATTACCAGGG GAATTCCCGG AGTAGAATGG ACCACAGGTA ATCTAGGTCA AGGGTTATCT GCTGGTATTG GAATGGCGAT TGCTGGTAAA TTAAAAAAGG AAAATTATCA TGTTTTTGTG GTAATGAGCG ATGGTGAAAG TGCCAAAGGC CAAGTTGCAG AAGCAAGAAG AACTGCACGA AAATTCAATT TAGATAACTT AACAGTTATA ATTGACTATA ACGATATTCA AATAAGTGGT AGAGCTAGCA ACATAATGTA TGTAGATCTT AGAGAGGAAT ATCAAGCTGC AGATTGGAAT GTTATTGAAA TTGATGGACA TGATTTTGAA CAAATTATAT CTGCACTAAA AATTGCAAAA AACGATAAAA AACCTACAGT GATAATTGCA CACACCATTA TTGGAAAAGG TGTAAGCTTT ATGGAAGATA CTCCAAAATA TCACGGTAAA CCTTTGAGTT TAGATGAATA CGAAAAAGCA ATAAGTGAAC TTGGGCTTTC AGTAGATATT GAAAAATACA TAAAAATGAG AGAAAAACTT GATATTCGCG AACACAAACA ATTGAAATTA AAGTATGAAA TTAACATTGA TACTGGCAAT CCTAAAATAT ATAGAGAAAA AACAGATAAT AGAACTGCTT TAGGAAATGC TATTGCTGAT CTTGCTCAAC TTAACAATAA TGTCGTAGCT ATTGACTGCG ACCTTAAATC ATCAGTAAAA TTAGACATTC TTGATAAAAT AAAACCTGAG AAATTAATTG AAATTGGTGT TCAAGAACAT AATGCAGCAG CTCTTGCTGG TGCTTTAAGT GCTGAAGGAT TTGTAACATT CTTTGCAGAT TTTGGAGTAT TTGGAATTGA TGAAACTTTT AATCAGCACA GATTAAACGC CATAAACAAT ACAAATCTAA AAGTGGTTGT AACACATTGT GGCGTCGATG TCGGTGAAGA TGGAAAAACA CATCATGCAT TAAACTATAT TTCTGCTCCA CTTGCATGGT TTGGATTCAA AGTTATTGTA CCTGCAGATC CAAATCAAAC TGACAAAGTT GTAAGATATG TTGCTTCTCA ATATGGAAAT TACGTTGTAG CTATGGGAAG AAGCAAGGTT TCTTCCATCA CAAAACCTGA TGGTTCTCTA TTTTTTGATG AAAATTATGA ATTCAAGTAC GGAAAAATTG ATGTAATAAG AGATGGAGAG GATATAGTAA TAATAACCTT AGGTTCAGTG CTACCACACG CATTAAAAGC TGTAGACGAA CTTGCAAAAG AAGGAATTAA TGTAGGTTTA CTAAATGTTT CTTGTCCTTT TGATCTTGAT GAAGAAGCTC TTTCAAGATA TGCAAGAAAC AAAGTAATAG TAGTCGAAGA CCACAACGTG TACAACGGTC TTGGAACATT AATCGAATCT AAATTATTCA ATTTAAAAAT ATTACCGGAT ATGTTTATCA AAGTAGGAAT AGATAGATTC CCTGTTTCTG GAAATAGCAA ATATCTGTTT AATATTTACG GACTTGATAG TGAAAAAATA AAAGAAACTA TTAAAAGTAT GATATAA
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Protein sequence | MIKNLEEIAR QCRADILTMT TVAASGHPGG SMSSIDLLVS LYSFANIFPN DPWNEKRDRI VVSHGHISPA VYSTLAAYGF VNRDEVIAGF RHPSSIFEGH ITRGIPGVEW TTGNLGQGLS AGIGMAIAGK LKKENYHVFV VMSDGESAKG QVAEARRTAR KFNLDNLTVI IDYNDIQISG RASNIMYVDL REEYQAADWN VIEIDGHDFE QIISALKIAK NDKKPTVIIA HTIIGKGVSF MEDTPKYHGK PLSLDEYEKA ISELGLSVDI EKYIKMREKL DIREHKQLKL KYEINIDTGN PKIYREKTDN RTALGNAIAD LAQLNNNVVA IDCDLKSSVK LDILDKIKPE KLIEIGVQEH NAAALAGALS AEGFVTFFAD FGVFGIDETF NQHRLNAINN TNLKVVVTHC GVDVGEDGKT HHALNYISAP LAWFGFKVIV PADPNQTDKV VRYVASQYGN YVVAMGRSKV SSITKPDGSL FFDENYEFKY GKIDVIRDGE DIVIITLGSV LPHALKAVDE LAKEGINVGL LNVSCPFDLD EEALSRYARN KVIVVEDHNV YNGLGTLIES KLFNLKILPD MFIKVGIDRF PVSGNSKYLF NIYGLDSEKI KETIKSMI
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