Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1750 |
Symbol | |
ID | 5297563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1740403 |
End bp | 1741083 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640770022 |
Product | ABC transporter related |
Protein accession | YP_001306974 |
Protein GI | 150021620 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.465278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAA CTTTAAAAAA TGTAAGTTAT GTTTATAATC CAGATACTCC ATTTGAAAAA AAAGTTTTAG ATTCCATTAA TTTAAAAATA GAAAATGGTG AAACTATATT TGTTATAGGT AAAACAGGAA GTGGAAAAAC AACATTGCTT TATTTACTTG ATTTTTTAAT TAAGCCAACT AGTGGAGAAG TTTTAGTCAA TGATTTTGAA AATCCATTTG AAAGGCCTTA TGAATATAGA AGATACATTG GTTTTGCTTT TCAATTCCCA GAAAAGCAGT TTTTTTCGGA AACAGTTGAA GATGAAATAT ACTTTTCAAT AAAAAATTTT AGAGTTGATA ATCCAGAAAA AAGATTTAAT GAAATAGTTC ACTTTTTTCA ACTTCAAGAT TATTTGAAAA AATCTCCGTT TCAGCTTTCT GGGGGGGAGC AAAGAAGGAT TGCGTTAGCA AGTGCTTTAG CTCATGATCC TAAAATTTTA ATTTTGGATG AACCAACAGT AGGATTAGAT AGGAAAAACG AAAGGAAAAT AATAGAATAT TTAAGAAATT GGAAAGATTC CAAAGGAAGG ACTTTAGTTA TTGTAACTCA TGACATTGAA AAATTTTCGG ATTTTAATGG AAAAGTTTAT AAACTTATTC ATGGAAAATT AATAAGAAAG GGGAATAAAA TTGAAATTTG A
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Protein sequence | MNITLKNVSY VYNPDTPFEK KVLDSINLKI ENGETIFVIG KTGSGKTTLL YLLDFLIKPT SGEVLVNDFE NPFERPYEYR RYIGFAFQFP EKQFFSETVE DEIYFSIKNF RVDNPEKRFN EIVHFFQLQD YLKKSPFQLS GGEQRRIALA SALAHDPKIL ILDEPTVGLD RKNERKIIEY LRNWKDSKGR TLVIVTHDIE KFSDFNGKVY KLIHGKLIRK GNKIEI
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