Gene Tmel_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1750 
Symbol 
ID5297563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1740403 
End bp1741083 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content27% 
IMG OID640770022 
ProductABC transporter related 
Protein accessionYP_001306974 
Protein GI150021620 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.465278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA CTTTAAAAAA TGTAAGTTAT GTTTATAATC CAGATACTCC ATTTGAAAAA 
AAAGTTTTAG ATTCCATTAA TTTAAAAATA GAAAATGGTG AAACTATATT TGTTATAGGT
AAAACAGGAA GTGGAAAAAC AACATTGCTT TATTTACTTG ATTTTTTAAT TAAGCCAACT
AGTGGAGAAG TTTTAGTCAA TGATTTTGAA AATCCATTTG AAAGGCCTTA TGAATATAGA
AGATACATTG GTTTTGCTTT TCAATTCCCA GAAAAGCAGT TTTTTTCGGA AACAGTTGAA
GATGAAATAT ACTTTTCAAT AAAAAATTTT AGAGTTGATA ATCCAGAAAA AAGATTTAAT
GAAATAGTTC ACTTTTTTCA ACTTCAAGAT TATTTGAAAA AATCTCCGTT TCAGCTTTCT
GGGGGGGAGC AAAGAAGGAT TGCGTTAGCA AGTGCTTTAG CTCATGATCC TAAAATTTTA
ATTTTGGATG AACCAACAGT AGGATTAGAT AGGAAAAACG AAAGGAAAAT AATAGAATAT
TTAAGAAATT GGAAAGATTC CAAAGGAAGG ACTTTAGTTA TTGTAACTCA TGACATTGAA
AAATTTTCGG ATTTTAATGG AAAAGTTTAT AAACTTATTC ATGGAAAATT AATAAGAAAG
GGGAATAAAA TTGAAATTTG A
 
Protein sequence
MNITLKNVSY VYNPDTPFEK KVLDSINLKI ENGETIFVIG KTGSGKTTLL YLLDFLIKPT 
SGEVLVNDFE NPFERPYEYR RYIGFAFQFP EKQFFSETVE DEIYFSIKNF RVDNPEKRFN
EIVHFFQLQD YLKKSPFQLS GGEQRRIALA SALAHDPKIL ILDEPTVGLD RKNERKIIEY
LRNWKDSKGR TLVIVTHDIE KFSDFNGKVY KLIHGKLIRK GNKIEI