Gene Tmel_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1739 
Symbol 
ID5296698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1728426 
End bp1730366 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content29% 
IMG OID640770011 
Productferrous iron transport protein B 
Protein accessionYP_001306963 
Protein GI150021609 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00069018 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGATAT CAGTAGCATT GGTTGGAAAT CCAAATGTTG GTAAAACTAG TATTTTCAAT 
AGACTTGTTG GTGCAAGACA ATACGTTGCA AATTGGCCGG GGGTTACTGT AACAAAAATT
GAAGGGGCGA CTGAGTGGCG CGGTAATACT TTACATATAA TTGATTTACC TGGGACTTAT
TCATTAACTT CAAAAACTAT TGATGAACAA GTAGCTAGAG ACTATTTATT TTTTTCTCCA
CCTAATGTTA CTGTGTTAAT AGCAGATTCA TTGAATCCTG AACAAAGTTT TTATCTTTTA
ATAGAGTTAT TAGAAATAAC AAATGATGTT ATATTAGTTA TGAATTCAAT TGATGAAGTT
AAAAATAAAA AGATAAAGAT AGATAAGTTT GAATTGGAGA AACATTTTGG TGTGCCTGTG
GTGTTTACTT CGGCAAAAAC CGGAGAAGGT ATTGATGAAT TAAAAGATAA AATTGTTGAA
GTTGCAAATG GAAAGCATAC TAAAAAGGTT TTATTTGATT ATCGTGAATT GGAAAAGCAA
ATAAGTATGG TTATGGATAA AATTCCTGAA AATGTTTTTA AAAATAAAAG ATATGCAGCA
CTGAAATATT TAGAAGGTGA TGAATTTTTT AAAGAAAAAA TAGATAAATA CGTAAATTTT
AATAATTTTA ATAATTTTGC TACTGAAATT TCTAAAATAA GGTATGAGTA TGTAAGTTAT
ATAATAAAAG AGGCATATAG TGGTATAGAG CTTGCTAATG TAAAAAATTT AAGTTATAAA
ATTGACCATA TTTTAACACA TAAATTTTTT GGTATTCCAA TATTACTTCT TATCTTCTAT
TTTGTATTTA AATTTACTTT CGAAATAGTT CAACCACTGT CAGATTTTTT AGATATTGCT
TTATCGAATT TTGCTGAATA TATAAAATCA TTTGGTGACA ACATGTTTTT TGCTCTAATT
GCGGATGGTA TTATTGGAGG TGTGGGTGGT GTTCTGGTGT TTGTTCCAAA TATTTTTGGA
TTATTTTTAA TGCTTGGAAT TTTAGAAGAA TCAGGATATT TGCCGAGAGC AGCTTTTGTA
TTGGATAGGA TTATGTATAA ATTAAAATTA TCTGGAAGGG CTTTTATGTC ATTAATTTTA
GGTTTTGGAT GTAATGTTCC GTCTATAATG ACTGCAAGAG GATTACCTGA TGAGAAAGAA
AGGATTGGAA CAATTATTTC GTCTCCATTT ATAAGTTGTA GTGCAAGATT ACCTGTATAT
ATAATGATAA TTAGTATTTT CTTCCAGGGG TATAAAGCGG AAGTTCTTTT TAGTATTTAT
CTTATAAGTA TATTATTAAC TGCTTTTTCT GCGTATTTTG TAAACAAGAT TTTTTTCAAG
GGCGAAAATG TTCCACTAAT AATGGAACTA CCAAGATATA GAATCCCAAC TGTAAGGAAT
ATTCTAATAT ATATGTGGAA TAAAGGAAGT CATTTTTTAA AGAAGGCAGG AACAATAATT
TTGGTTACAA GTATTGCTGT ATGGGCATTA ACATATTTTC CAAATAATGG TAATGTTGAA
ACTAGCTTTG CATCTTATGT GGGAAAAGGT TTAGCATATG TATTAAAGCC ACTTGGGTTT
GATTGGAAAG TAGGAACCGC TTTGTTTTTT GGAGGTGTTG CAAAGGAAGT AATTGTTTCA
ACCTTTTCTA TGTTATATGG CTTTTCAGAG GGGGATGTTT TATCTGCTAA ATCTGCACTT
GCAGCTTCTA TGAATCCTTT AACTGCATAT GCATTTCTCA TATTTGTTTT GCTTTATATT
CCTTGTTTTG CAACCCTTGC AACCATTAAA TCTGAAACTG GAAGCTGGAA ATGGATGATA
TTTTCCATTA TGTATAGCTT TAGTTTAGCG TATTTATTTT CATATATTAT TGTATTCTTT
GGAAAAATAT TTATTTTTTA A
 
Protein sequence
MVISVALVGN PNVGKTSIFN RLVGARQYVA NWPGVTVTKI EGATEWRGNT LHIIDLPGTY 
SLTSKTIDEQ VARDYLFFSP PNVTVLIADS LNPEQSFYLL IELLEITNDV ILVMNSIDEV
KNKKIKIDKF ELEKHFGVPV VFTSAKTGEG IDELKDKIVE VANGKHTKKV LFDYRELEKQ
ISMVMDKIPE NVFKNKRYAA LKYLEGDEFF KEKIDKYVNF NNFNNFATEI SKIRYEYVSY
IIKEAYSGIE LANVKNLSYK IDHILTHKFF GIPILLLIFY FVFKFTFEIV QPLSDFLDIA
LSNFAEYIKS FGDNMFFALI ADGIIGGVGG VLVFVPNIFG LFLMLGILEE SGYLPRAAFV
LDRIMYKLKL SGRAFMSLIL GFGCNVPSIM TARGLPDEKE RIGTIISSPF ISCSARLPVY
IMIISIFFQG YKAEVLFSIY LISILLTAFS AYFVNKIFFK GENVPLIMEL PRYRIPTVRN
ILIYMWNKGS HFLKKAGTII LVTSIAVWAL TYFPNNGNVE TSFASYVGKG LAYVLKPLGF
DWKVGTALFF GGVAKEVIVS TFSMLYGFSE GDVLSAKSAL AASMNPLTAY AFLIFVLLYI
PCFATLATIK SETGSWKWMI FSIMYSFSLA YLFSYIIVFF GKIFIF