Gene Tmel_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1725 
Symbol 
ID5296706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1710856 
End bp1711422 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content29% 
IMG OID640769997 
Producthypothetical protein 
Protein accessionYP_001306949 
Protein GI150021595 
COG category[S] Function unknown 
COG ID[COG4902] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.952025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACAA GTTTATTAGT ATTTGGAGTA AATACTGCAG ATATCGTAAA TTTATTGCCA 
TATGAAACGT TATCAGTAAG TGAAACTGAA AGCATTATGC AAATGAGAAA GGAAGAAAAG
CTAGCAAGAG ATGTGTATTT AGTTTTTTAT GATTTGTGGG GAATAAGAGT ATTTAGTAAT
ATAGCTGGAG CAGAGCAACA ACATATGGAT GCAGTTTTAA CATTGATCAA AAAATACGAT
TCGAATGATC CAATAAAAGT AGATGAAAGA GGTATATTTG AAGATGAAAA TTTACAGGCG
CTATATAATC AATTAGTTGA ACAAGGTAGT AAGTCACTAG AAGATGCATT AATTGTAGGA
GCAACAATAG AGGATTTGGA CATATATGAT TTAGAAGAAT TCTTAAAAAT CACTGATAAT
CAAGACATTG AGTTTGTATA TAAAAATTTA ATAAAAGGTT CTGAAAATCA TATGAGAGCA
TTTGTAAGCC AATTATCAAG ATTTAGTAAG ACGTATACTC CAAAATACAT TTTCCTCGAA
AAATTTAATG AAATTATTTC AAATTAG
 
Protein sequence
MSTSLLVFGV NTADIVNLLP YETLSVSETE SIMQMRKEEK LARDVYLVFY DLWGIRVFSN 
IAGAEQQHMD AVLTLIKKYD SNDPIKVDER GIFEDENLQA LYNQLVEQGS KSLEDALIVG
ATIEDLDIYD LEEFLKITDN QDIEFVYKNL IKGSENHMRA FVSQLSRFSK TYTPKYIFLE
KFNEIISN