Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1725 |
Symbol | |
ID | 5296706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1710856 |
End bp | 1711422 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640769997 |
Product | hypothetical protein |
Protein accession | YP_001306949 |
Protein GI | 150021595 |
COG category | [S] Function unknown |
COG ID | [COG4902] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.952025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACAA GTTTATTAGT ATTTGGAGTA AATACTGCAG ATATCGTAAA TTTATTGCCA TATGAAACGT TATCAGTAAG TGAAACTGAA AGCATTATGC AAATGAGAAA GGAAGAAAAG CTAGCAAGAG ATGTGTATTT AGTTTTTTAT GATTTGTGGG GAATAAGAGT ATTTAGTAAT ATAGCTGGAG CAGAGCAACA ACATATGGAT GCAGTTTTAA CATTGATCAA AAAATACGAT TCGAATGATC CAATAAAAGT AGATGAAAGA GGTATATTTG AAGATGAAAA TTTACAGGCG CTATATAATC AATTAGTTGA ACAAGGTAGT AAGTCACTAG AAGATGCATT AATTGTAGGA GCAACAATAG AGGATTTGGA CATATATGAT TTAGAAGAAT TCTTAAAAAT CACTGATAAT CAAGACATTG AGTTTGTATA TAAAAATTTA ATAAAAGGTT CTGAAAATCA TATGAGAGCA TTTGTAAGCC AATTATCAAG ATTTAGTAAG ACGTATACTC CAAAATACAT TTTCCTCGAA AAATTTAATG AAATTATTTC AAATTAG
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Protein sequence | MSTSLLVFGV NTADIVNLLP YETLSVSETE SIMQMRKEEK LARDVYLVFY DLWGIRVFSN IAGAEQQHMD AVLTLIKKYD SNDPIKVDER GIFEDENLQA LYNQLVEQGS KSLEDALIVG ATIEDLDIYD LEEFLKITDN QDIEFVYKNL IKGSENHMRA FVSQLSRFSK TYTPKYIFLE KFNEIISN
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