| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1662 |
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| Symbol | |
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| ID | 5298004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1649247 |
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| End bp | 1650062 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640769939 |
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| Product | CRISPR-associated RAMP Cmr6 family protein |
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| Protein accession | YP_001306891 |
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| Protein GI | 150021537 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.894194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATT ATAAATATGA TATAGAGAAA CTTAAAGATA AGAATTCATT TATTAAAAAC
GCAAGTTTAT ATTACAATAA ATTCGTATTT AAGGAATTGG TAGTGTTAAA TAACAAAATT
ACATCTAAAT CATTTAAAAA ATCTTTGAAG GAAATAAGAG AAAGATATAA AGACGTTTTA
ATTTCTATTA TTAAAAACTT ATTTGAATCT TCAAAATCGG GAAGTGATTC TTTACAAGAA
ATAATTAACT CCTTACGAAA AATAAGGGAA AATTTTATCA ATTCTTTAAA ACAAAGATAT
ATTATATTGA GTTATACCTT AGAAGTTAAA ACTCCATTTT TAATAGGTGC AGGAATACCT
TCCATCGATG AAATAGGCTT TTATTGGTTG AGAAATTATG GAATACCAGT TATTCCTGGA
ACAAGCATAA AAGGATGTTT CAAGAGTTGT CTATTAGATG TTTTGAAGGA TTACTTAGAA
GAGATATTCG GAACAGAAGA CAAAATGGGA AAAGTAATTT TTCTTGATGC AATACCTTTA
GGTGAAATTT GTTTAGGAAT TGATTTTCAA ACACCACATT TTCAAAAATA TTACATTGAT
AACAAACCAC CAAATGATGT TTATAATCCT GTGCCACTGA GTTTCTTGCA TGTAAGTAAG
GGAAGATTTA GATTGGATAT ACTAATTGAT AAAGATGAAG GTAATATTGC TGATAAAATT
AAAAATCACA TAAAGATTTT TTTAGAAGAA TATGGAGTCG GTGCTAAAAC ATCTATGGGC
TATGGAAGAT TTAAAATTAT AAATCAAAAT AGTTAA
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| Protein sequence | MNYYKYDIEK LKDKNSFIKN ASLYYNKFVF KELVVLNNKI TSKSFKKSLK EIRERYKDVL
ISIIKNLFES SKSGSDSLQE IINSLRKIRE NFINSLKQRY IILSYTLEVK TPFLIGAGIP
SIDEIGFYWL RNYGIPVIPG TSIKGCFKSC LLDVLKDYLE EIFGTEDKMG KVIFLDAIPL
GEICLGIDFQ TPHFQKYYID NKPPNDVYNP VPLSFLHVSK GRFRLDILID KDEGNIADKI
KNHIKIFLEE YGVGAKTSMG YGRFKIINQN S
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