| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1657 |
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| Symbol | |
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| ID | 5298178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1643708 |
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| End bp | 1644832 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640769934 |
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| Product | CRISPR-associated RAMP Cmr1 family protein |
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| Protein accession | YP_001306886 |
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| Protein GI | 150021532 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1367] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01894] CRISPR-associated RAMP protein, Cmr1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.080883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAT TGAAATTAAC TATAAATTTT ACAACTCCTT CATTTGCAAG CAATAATAGA
AAAGATTTTA AACTAACTTC TCAAACAATA AGAGGTATCT TAAGATTTTG GTTTAGAGCT
ATTATTCCAA GAATTATCAA CATTCATAAA TACAATGAAT GTGATAAAAA ATTTATAGGA
TTAAAAAAAG CAGAAGAATT AATTTTCGGC TCTACGGAGA GAAAATCATC TTTTGATTTA
GTGATTGAAA CAGTTGATAA GCTTTTAGAA AAAAATAATA AAAATACATA TTACTTATAT
GGTTTGGAAG GCAGGAAATT TTCAAGAGAA AATTCTGAAT TTAAGCTAAT TTTTTACATA
AAAAACAAGC AAATGGAAGA TTCATTGAAA GATTTGTTAA AAAATCTTTT ACTGCTTATT
TCCACCGTTG GTGGTATTGG TGCAAAATCA AGAAAGGGAT TGGGAAGTTT TGAGGTGTTG
GGAGAAAAAA AGTATGAACT TGAAGAATTA TTGAAAATTC TAGATAACAT AAACAAAGAA
ATATTCAAGA GAAGAGGATT TGAATTTGAA CCTACAAAAT TTGACAATAA GAATGTTTCA
GATTACCCAG TATTAATGGA TGGTTATTAC GAATTTTTTA CCAAAGAACT TAAAACTAAA
AGTTTGGAAA AAGTTTTTGA AATTCTTTTT CATAATAGTA GAGATAGAAA TAGAAAAGGA
ATTTACCTCA AAACAAAATA TGACTTAAGA ATGGAAGGTA ATGACTCATT TAAAAAAGCA
ATAAATGCTT TAAATTTAAA TAAAAGAACT ACAAATATCA TTTTTTACCA ATCTATTTTA
GGTTTACCTA TAAATTATTA TATTAGAGGA AAAGGGCAAT TTAAATTAGA ATCAAAAGGC
AAAGAAAATA GAAAAGCTTC TCCCTTATTT ATTTCAATTC ACAGAGATAA AAATAACGAC
TATTTTGTGA ATTTTTTGAT TATGAAGAGT AAATTAACAA GTGATTTAGA ACCAAAATTA
GTATTTGGTG CAAGAAATAA AATCAGGAAT AAGATCGAAA TAAAGGGAAG TCACGAATAC
GGTAAACTTA TTAGAAACTT AAGAGATAAT TTAGAAAAAG TTTAA
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| Protein sequence | MEKLKLTINF TTPSFASNNR KDFKLTSQTI RGILRFWFRA IIPRIINIHK YNECDKKFIG
LKKAEELIFG STERKSSFDL VIETVDKLLE KNNKNTYYLY GLEGRKFSRE NSEFKLIFYI
KNKQMEDSLK DLLKNLLLLI STVGGIGAKS RKGLGSFEVL GEKKYELEEL LKILDNINKE
IFKRRGFEFE PTKFDNKNVS DYPVLMDGYY EFFTKELKTK SLEKVFEILF HNSRDRNRKG
IYLKTKYDLR MEGNDSFKKA INALNLNKRT TNIIFYQSIL GLPINYYIRG KGQFKLESKG
KENRKASPLF ISIHRDKNND YFVNFLIMKS KLTSDLEPKL VFGARNKIRN KIEIKGSHEY
GKLIRNLRDN LEKV
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