Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1651 |
Symbol | |
ID | 5297592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1640446 |
End bp | 1641432 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640769928 |
Product | CRISPR-associated Cas1 family protein |
Protein accession | YP_001306880 |
Protein GI | 150021526 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.730832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAACTT TATATATTTT TACTGATGGT GAATTAAGAA GGAAAAATAA TGCTTTATAT TTAAAACCCA AAGATAATAA TATGAAGCCA CTTTTTGTTC CGTTGAAAAG TGTTTCATCT TTGATGATAT TTTCAGAAGT TAGTATGAAT AAAAGATTTC TTGACCTTTT ATCTAAAGAA GGTATTCCTG CGTTTTTTTA CGGATATTAT GAAAATTTTA TTGGTACATT TTATCCAAAA CAGGTTAATA AAACAGGTGA GATGTTAGTT TTACAATATA AACACTACGA GGATATTAAT AAGCGTTTAA AAATTGCTAG TGAAATTCTA AATGCTGCGG TTGATAATAT GGTTAATTTA TTGAGTAGTT TTAAAGAAAT AACACATACG GAGATAGAAT ATATAACAAA ATTGAAAGCA TCTTTTAAAA AGCAGCGTAA TATTCCTGCG TTGATGGCAA TAGAAGGAAA TATTAGAAAG GTATATTATT CTGCTATTGG AAAAATAGTA GGAAAAAAGG ACTTTGAATT TGTGGAAAGA ACTAAACAAC CACCTAAGGA TAAAATTAAT GCACTAATAA GTTTTGGAAA TGTTGTTTTG TACAATATTG TACTGGCAGA AATATACAAA ACTTCATTAG AACCTCGAAT AAGTTTTTTA CATGAACCAA ATAAAAGGAA CTTTTCCTTG CAGTTGGATA TTTCGGAAAT TTTTAAACCA ATAGTGGTTG ACAAAGTAGT TTTAAAATTG ATAAATAATG GCATGATAAA AAAGAAAGAT TTTGAAAATG TAAAAGATGG AGTATATCTT TCAAAAGAAG GCAAAAAGAA ATTTGTTCAA GAATTGGAAA ATAGATTGGA AAAGAAGATT TTTTTGTATA AAGATCAAAG AGTAACTTTA AAAACAGTTA TTTTACATGA ATGTTATAAA TTAATCAGGC ATCTAAAAGG AGAAGAGGAA TATAAAGGAT TTGTATTAAA GGAGTGA
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Protein sequence | METLYIFTDG ELRRKNNALY LKPKDNNMKP LFVPLKSVSS LMIFSEVSMN KRFLDLLSKE GIPAFFYGYY ENFIGTFYPK QVNKTGEMLV LQYKHYEDIN KRLKIASEIL NAAVDNMVNL LSSFKEITHT EIEYITKLKA SFKKQRNIPA LMAIEGNIRK VYYSAIGKIV GKKDFEFVER TKQPPKDKIN ALISFGNVVL YNIVLAEIYK TSLEPRISFL HEPNKRNFSL QLDISEIFKP IVVDKVVLKL INNGMIKKKD FENVKDGVYL SKEGKKKFVQ ELENRLEKKI FLYKDQRVTL KTVILHECYK LIRHLKGEEE YKGFVLKE
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