| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1638 |
|---|
| Symbol | |
|---|
| ID | 5297912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1626423 |
|---|
| End bp | 1627742 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640769915 |
|---|
| Product | Beta-glucosidase |
|---|
| Protein accession | YP_001306867 |
|---|
| Protein GI | 150021513 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
|---|
| TIGRFAM ID | [TIGR03356] beta-galactosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAA AAAGAAGTGA TTTTCCTAAA GAATTTATTT TTGGAACGGC AACTTCCGCT
TATCAAATTG AGGGAGCTGC TTTTGAAGAT GGAAAGGAAC CATCAATATG GGATATTTTT
TCGCATGAAA AAGGGAATGT AAAGAATATG GAAAATAGTG ATGTGGCATG TGATCATTAT
TATAGATTTG AAGAAGATGT GGAATTAATG TCTCAATTGG GATTAGATGC TTACAGGTTT
TCCATTTCTT GGCCGAGGGT TTTGAACAAG AACGGAAAGA AAAATCAAAA GGGAATAGAT
TTTTATAACA GACTTGTAGA TAAGTTATTG GAAAAGAATA TTATTCCATT TATTACTCTG
TATCATTGGG ATTTACCCTA TTATTTGTAC GAAAAAGGTG GTTGGGTAAA CGACGATATA
GCATTGTATT TTAGAGATTA TGCAGCAATG ATGTTTGAAT TATTAGGAGA TAGGGTAAAA
CATTGGATAA CATTAAATGA ACCATGGTGT TCCGCGTTTC TTGGATATTA TATGGGAATC
CATGCCCCTG GTCATAAAGA CATAAATGAA GCTTTAAAGG CTGCTCATAA TTTGCTTAGA
GCTCATGGAT ATGCTGTAGG TGTTTTTAGA GAAATAGTAA AAGATGGAAA GGTTGGAATT
ACAAATGTTG TAATGAAGGT AGAGCCTGCA AATGAAGTAG AAGAAGATTA TCAGATGGCT
GTGTTAGTTG ATGAATTTAT AAATGGTTGG TTCCATGATC CGGTAGTTTT TGGTAAATAT
CCAGAAAATG CGAAGGGAGT GTTTGGAAAA CTTGGCATTA GAACTTACGA TAATGATTTG
GATATAATAT CTGTTCCTAT TGACTTTTTT GGAGTAAATT ATTATACAAG ACAATTGGTT
ACTTATGACC CTGATGAGCC TTTTATGTAC AAAATAGTTC CAGGAAATTT ACCTAAAACG
GAAATGGGAT GGGAAGTTTA CCCTTCAGGG TTATATGATA TGCTAAAAAA ACTTTATATT
AGGTATAGGT TACCATTATA TATAACTGAA AATGGTATGG CAGGACCGGA TAAATTGGAA
GGAGGATTGG TCAAAGATAC ATATAGAATT GATTATCTAA TGAAACACTT TGAAATGGCT
TTGAAAGCAA TTAATGATGG TATAGACTTA AGAGGGTATT TTATATGGAG TTTAATGGAT
AATTTTGAAT GGGCTGAGGG TTATTCAAAG AGGTTTGGGA TAATATATGT TGATTATTCA
ACACAAAAGA GATATTTTAA AGATAGCGCG TTATGGTTGA AAGACTTTTT AAATAGTTAA
|
|---|
| Protein sequence | MKIKRSDFPK EFIFGTATSA YQIEGAAFED GKEPSIWDIF SHEKGNVKNM ENSDVACDHY
YRFEEDVELM SQLGLDAYRF SISWPRVLNK NGKKNQKGID FYNRLVDKLL EKNIIPFITL
YHWDLPYYLY EKGGWVNDDI ALYFRDYAAM MFELLGDRVK HWITLNEPWC SAFLGYYMGI
HAPGHKDINE ALKAAHNLLR AHGYAVGVFR EIVKDGKVGI TNVVMKVEPA NEVEEDYQMA
VLVDEFINGW FHDPVVFGKY PENAKGVFGK LGIRTYDNDL DIISVPIDFF GVNYYTRQLV
TYDPDEPFMY KIVPGNLPKT EMGWEVYPSG LYDMLKKLYI RYRLPLYITE NGMAGPDKLE
GGLVKDTYRI DYLMKHFEMA LKAINDGIDL RGYFIWSLMD NFEWAEGYSK RFGIIYVDYS
TQKRYFKDSA LWLKDFLNS
|
|---|
| |