| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1636 |
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| Symbol | |
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| ID | 5297923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1623967 |
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| End bp | 1625364 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640769913 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001306865 |
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| Protein GI | 150021511 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGGG ATAGTAGCAA AAAGTTACTT GTAGTTGATG ATAGTAAATT TTGGCGTTCC
TTAATAACAG ATTTGTTGAA AGATTCGTTT AAAATCTATG TAGCGGAATC TGGAATTGAT
GGGTTGAAAA TAGCAACAAA AGTTAAACCA GACATTGTAA TTACAGATTA TAACATGCCA
GATTTAAATG GTATTTTTCT TTCAATAGTG TTAAGAAAAT ACCAAGCATT TGAGAATGTT
GGCATTTTTA TTTTAACAAG TTCTGATGAT AAGATAAATG ATTTTTGGGC TAAGAAAAGT
GGAGCAAATG GTTTTTTTTC AAAGTCAATT TTTAATAGTA AAGATGAATT AGATAAATTT
GTTAATGAAA TAAAAGTGAA AAAATTTTTC TCTGTAGAAG ATTATGTAAA AAGTGAAATT
TCAAGCGAAA AAGCTTATGA AATAATTGAA GAACGACTTA AAGAGGAAAT TTACGAAAAA
GAGATTTTAA ATCTTTTAAA ATATATTAGA GATGAAGAAT ATCTTATGGA AAGATTAAAT
GGTCTTTTTG GTAGTTTATT TAGTTATGAA TCATTTTTGG CACTTGTTTT AAGTGAGAGC
GAAGCAAGGA TTTATAGTTT TAACTCCCAT GTTTCACGTA ATCATGCTAA GGCTTTATTA
CTTTCGTACT TTGAAAAACC TACAATTCCA AAATCCTGGC ATTTTTTTGG TGATTTCGAT
GATAATAGTT TAAAAAAGTT AAAAAACTTC AAAAAGTATT TAGTAAAGTA CGATAACAAG
GAACATGCAT TGCTCTTATT TGAAAATGTA AACTATGAGT TCGATAAAGT GATAAATTTT
GTCGGTAAAA GTTTGGGGAT TGTTTTTTCG ACGATAAATA ACTTTAAAGA ATATTTTGTA
GCTTCTCAAT ATGATTCTTT AACGGGGTTG TACAATAAAA AAGTTTTGAT GAATAAAATT
GAGGAATACA TTGATAAGTA TGAGGAAGAT ACGGTATTAG CTATTTTTGA TATAGATAAT
TTCAAATCAA TAAACGATAC TTATGGACAT GTGGTGGGAG ATAATGTTTT AAAGGAAATA
GCTAATATAA TTAGATCTAT TACTAAAGGA AATGGAATAT GTGCACGATA TGGTGGAGAA
GAGTTTGTTA TATTGTTTAC AGATTCAGAA AGTGCAATTG AGATTGTTTC TAAAATTTAT
TCTAAGATCA GAAAAAATAA TTGGCCCAGT TTGTTAAATG ATAATAGAAT AGTAACTGTT
AGTTGTGGAA TTGCAAGGTA TAGGAATGGA CTAAGGATAA CGGAGTTTAT AAACAAAGCG
GATGAATTAC TATATAAGGC AAAAAAAGAT GGGAAAGATA GATATTATGT ATCAGAAGAA
GTGGGGGAGA TTATATGA
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| Protein sequence | MNGDSSKKLL VVDDSKFWRS LITDLLKDSF KIYVAESGID GLKIATKVKP DIVITDYNMP
DLNGIFLSIV LRKYQAFENV GIFILTSSDD KINDFWAKKS GANGFFSKSI FNSKDELDKF
VNEIKVKKFF SVEDYVKSEI SSEKAYEIIE ERLKEEIYEK EILNLLKYIR DEEYLMERLN
GLFGSLFSYE SFLALVLSES EARIYSFNSH VSRNHAKALL LSYFEKPTIP KSWHFFGDFD
DNSLKKLKNF KKYLVKYDNK EHALLLFENV NYEFDKVINF VGKSLGIVFS TINNFKEYFV
ASQYDSLTGL YNKKVLMNKI EEYIDKYEED TVLAIFDIDN FKSINDTYGH VVGDNVLKEI
ANIIRSITKG NGICARYGGE EFVILFTDSE SAIEIVSKIY SKIRKNNWPS LLNDNRIVTV
SCGIARYRNG LRITEFINKA DELLYKAKKD GKDRYYVSEE VGEII
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