| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1633 |
|---|
| Symbol | |
|---|
| ID | 5298209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1620971 |
|---|
| End bp | 1621312 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640769910 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001306862 |
|---|
| Protein GI | 150021508 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.905106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTTT CCAAACCAGA AAGAGTAGAA CCTATAATAA TAGATGAAGG AAAAATTGAA
AAAAGGATTT TAATTGGTTC AAAAGATGGA GCCGAAAGAT TTGTAATGAG ATTGTTTAAA
TTACAACCTG GTGCTAACAC ACCATATCAT ACCCATGATT GGGAGCATGA GATATTTGTT
GTGAGGGGAA AGATACAAGC GGTATCGAAA GATAAGAAGA TAGTTGCAGA AGAGGGAAGT
TTTATTTTTG TTAAGCCCAA TGAAGAACAT CAATTTGTCA ATATAGGGGA TGTTGATGCA
GAATTTATTT GTGTGATACC GTATATACCA AACAATGAAT GA
|
|---|
| Protein sequence | MIVSKPERVE PIIIDEGKIE KRILIGSKDG AERFVMRLFK LQPGANTPYH THDWEHEIFV
VRGKIQAVSK DKKIVAEEGS FIFVKPNEEH QFVNIGDVDA EFICVIPYIP NNE
|
|---|
| |