Gene Tmel_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1632 
Symbol 
ID5298229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1620346 
End bp1621017 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content31% 
IMG OID640769909 
Productsingle-stranded nucleic acid binding R3H domain-containing protein 
Protein accessionYP_001306861 
Protein GI150021507 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.694857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAAAGC TGACACTTAC AGGAAAAAAT GTGGAAGAAA TTTTAACAAT ATTTGAGGAA 
GATATGAATA TAAAAAAAGG AGAATATGAT TATTTGGTTA TTGATAAAGG TTCAAGTGGT
TTTTTAGGTT TTTTGTCTCG TGATGCGGTA GTTGAAGTTA CGATAAAGAA AGAATACTAC
GAAAGAAAAT TGAAAGAGTT TTTGGAAAAT GTGGTAAGAT GTTTTGATGA AGGAATAAGT
GTAGAGGTGT TTTCAAAGAA TAATAGGGTT TTTATTGCAA AGATAAAAGG AGAGGGTATC
GGGAAAATAA TTGGAAAACA CGGAAAAGGT TTAGGTGCAT TGCAGCATAT TGCTACAATT
TTTCTAAATA GATTGTCTGA TATAAAAATT ACTGTGATTA TAGACGCGGG AGACTATAGG
GAAAAAAGAA AGGAATTGAT AAAAAATATT GTTGTAAATG CCGTTGAAAA GTTGAGAAAT
GGTGCAAAAA AGATAGAGTT GGATCCCATG TTTTCTTTTG AAAGAAGGTT AGTACATGAA
TTTTTAAAAA GATATCCAGA TGTTTTTTCA TATTCCGAAG GAGTTGAGCC GTATAGATAT
GTGGTAATTG AAAGGAGGGG AAAGAATGAT AGTTTCCAAA CCAGAAAGAG TAGAACCTAT
AATAATAGAT GA
 
Protein sequence
MRKLTLTGKN VEEILTIFEE DMNIKKGEYD YLVIDKGSSG FLGFLSRDAV VEVTIKKEYY 
ERKLKEFLEN VVRCFDEGIS VEVFSKNNRV FIAKIKGEGI GKIIGKHGKG LGALQHIATI
FLNRLSDIKI TVIIDAGDYR EKRKELIKNI VVNAVEKLRN GAKKIELDPM FSFERRLVHE
FLKRYPDVFS YSEGVEPYRY VVIERRGKND SFQTRKSRTY NNR