Gene Tmel_1619 details

Gene Information

• Locus tag: Tmel_1619
• ID: 5297082
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1607746
• End bp: 1608396
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640769896
• Product: putative translaldolase
• Protein accession: YP_001306848
• Protein GI: 150021494
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0176] Transaldolase
• TIGRFAM ID: [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAT TTTTGGATAC TGCAAAGATA GATGAAATAA AAAAAGGTGT AGAATGGGGA 
ATTGTAGATG GAGTTACCAC AAATCCCACC CTCGTTTCTA AAGCGGGAAC ACCATTTAAG 
GAGACGATAA AACAAATTTG TGAAATTGTC CAAGGTCCTG TATCTGCTGA GGTTGTTTCA 
TCGGATTGGC AAGGAATGGT TGAGGAAGCG AGGAATTTAG CGAAAATAGA TGAACATGTT 
GTTATTAAGA TCCCAATGAC ACCAGATGGT TTGAAAGCAG TGAAGATTTT ATCTACCGAG 
GGTATAAAAA CTAATGTTAC TCTTGTTTTT AGTGCAAATC AATCATTGTT AGCAGCTAAA 
GCGGGTGCAT CATATGTGAG TCCTTTTGTA GGTAGAATGG ATGATATAGC AAACGATGGT 
ATGAGAATGG TTGAGGAGAT AATTACCATT TATTCAAATT ACGGGTTTGA AACGGAAATT 
ATTGTTGCAA GTATAAGACA TCCTAGGCAT GTTTTAGAAG CAGCTTTAAT GGGTGCAGAT 
ATTGCAACAG TTCCTTTTGC AGTGCTTGAA AAAATGTTTT ATCATCCAAT GACTGATTTA 
GGTATTGAAA GGTTTCTTAG AGATTGGGAA AAATATAAAG CGGGTAGGTG A 

 

Protein sequence

MKIFLDTAKI DEIKKGVEWG IVDGVTTNPT LVSKAGTPFK ETIKQICEIV QGPVSAEVVS 
SDWQGMVEEA RNLAKIDEHV VIKIPMTPDG LKAVKILSTE GIKTNVTLVF SANQSLLAAK 
AGASYVSPFV GRMDDIANDG MRMVEEIITI YSNYGFETEI IVASIRHPRH VLEAALMGAD 
IATVPFAVLE KMFYHPMTDL GIERFLRDWE KYKAGR