| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1577 |
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| Symbol | |
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| ID | 5297191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1563999 |
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| End bp | 1564934 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769854 |
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| Product | CaCA family Na(+)/Ca(+) antiporter |
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| Protein accession | YP_001306806 |
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| Protein GI | 150021452 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00101794 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCTAA CTTTGTTGGG ATTAATCGTT GGATTTGTTT TGCTCGTCAA AGGTGCCGAT
TGGTTGGTGG ATGGGGCAAC TTCAATAGCC TTAAATTTAG GGGTTTCAAA AATTGTTGTT
GGACTTTCTG TTGTTGCGTT TGGTACTTCA CTACCTGAAT TGGTTGCCTC GTTGGTTTCC
GTGATAAAAG GCCACTCAAG TGTTTCCATT TCTAATGTAG TGGGAAGTAA TATTGCAAAT
ATTGCAATAG CACTGGCTTT ATCTTCTTTA TTTGTAAGTA TAAATATAAA AAAGAATACG
ATTAAAGCTG AAATGCCTTT TATGATTATT TCTACAATTG TGTTTACTGT TTTGTTTATA
AAAGATAACT CTTTAACGTG GAACTATGGT GTTGTTTTCA TTTCTCTTTT GGTGATATAT
CTATATTATT TAATAACTAG TGCAAAGAAT GTTGTAGAAG AAGAGTTTAA AGATGAGGTT
AAATACAAAA CACATATTGC TTTACTTTTA ATTGTTGTTG GAATTGTGGG AATTTGGTTG
GGTGGAGATT TAACAATAGG AAATGTAATA AAGTTAGCGA AAAGTTTAGG ATTAAGTGAG
ACATTTGTGG GATTAACAAT TGTTGCAATT GGAACGTCTC TACCGGAAAT AGTTGTTAGT
ATAATATCTA CATTAAAAAA TGAAGCAGAT ATTTTGGTAG GTAATATTGT TGGAAGTAAT
ATTTTTAATA TTTTATTTAT TTTAGGTGTA AGTTCGTTGG TTGGAAATTT ATATGTGGAT
GTTCAAAACT TTACAATAGA TCTTATCATT ATGAATTTAT TTGTATTTAT TTTATTTTTT
ACTTCTTTAC TCAGGAAAAA AATTGGGAAA GTCGAGGGAA TATTCTTTTT GACAATATAC
GTGTTTTACA TATATCAAAT TTCTATTAGA AAATAG
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| Protein sequence | MFLTLLGLIV GFVLLVKGAD WLVDGATSIA LNLGVSKIVV GLSVVAFGTS LPELVASLVS
VIKGHSSVSI SNVVGSNIAN IAIALALSSL FVSINIKKNT IKAEMPFMII STIVFTVLFI
KDNSLTWNYG VVFISLLVIY LYYLITSAKN VVEEEFKDEV KYKTHIALLL IVVGIVGIWL
GGDLTIGNVI KLAKSLGLSE TFVGLTIVAI GTSLPEIVVS IISTLKNEAD ILVGNIVGSN
IFNILFILGV SSLVGNLYVD VQNFTIDLII MNLFVFILFF TSLLRKKIGK VEGIFFLTIY
VFYIYQISIR K
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