Gene Tmel_1574 details

Gene Information

• Locus tag: Tmel_1574
• ID: 5296770
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1561364
• End bp: 1561978
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640769850
• Product: electron transport complex RsxE subunit
• Protein accession: YP_001306803
• Protein GI: 150021449
• COG category: [C] Energy production and conversion
• COG ID: [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE
• TIGRFAM ID: [TIGR01948] electron transport complex, RnfABCDGE type, E subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0333623
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGTA AGACTTGGAA AGAATTTTCA AAAGGTTTTT TTGCGGAAAA TCCAACATTT 
GTGCAAGCGC TCGGTATGTG TCCAACTCTT GCAACAACGA CAAGTGCAAA GAATGGATTA 
GGTATGGGTT TGGCTGCAAC AGTAGTTTTG GTTTTATCAA ATATAGTGAT TTCAATTTTA 
AGAAGGGCTG TTCCTGAGAA AATAAGAATA CCTATTTTTA TAACTATAAT CGCTTCATTT 
GTTACTATGG TTGATCTTTT AATGCATGCT TATGTATATG ATTTGTGGAA AACTTTGGGA 
TTATTTATAC CACTTATAGT TGTTAATTGT TTGATAATGG GACGTGCAGA AGCTTATGCC 
TCAAAGAACA ATGTATGGTA TTCGATGATA GATGGATTGG GAATGGGCTT GGGCTTTACT 
GCAAGTTTGA CATTATTGGG TGCAATAAGA GAGCTTTTAG GTAATGGAAC GATATTTGAT 
GTGGTAGTTT GGGGTAAAGC TTTTAATGTG TTTATAATGA TTCTTCCCCC AGGAGCATAT 
TTAACCCTTG GTCTTTTGGC AGCTTTATTT GCTTTTATTG GTATGAAAAG AAAAGAAAGG 
GGGAAAGCTA AATGA 

 

Protein sequence

MSSKTWKEFS KGFFAENPTF VQALGMCPTL ATTTSAKNGL GMGLAATVVL VLSNIVISIL 
RRAVPEKIRI PIFITIIASF VTMVDLLMHA YVYDLWKTLG LFIPLIVVNC LIMGRAEAYA 
SKNNVWYSMI DGLGMGLGFT ASLTLLGAIR ELLGNGTIFD VVVWGKAFNV FIMILPPGAY 
LTLGLLAALF AFIGMKRKER GKAK