| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1571 |
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| Symbol | |
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| ID | 5296591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1558428 |
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| End bp | 1559744 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640769847 |
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| Product | electron transport complex, RnfABCDGE type, C subunit |
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| Protein accession | YP_001306800 |
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| Protein GI | 150021446 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGATTAT CGACCTTTTT AGGAGGAGTT CATCCCCCTG AAAATAAGCA TTTGTCAAAA
GATATTCCCA TAAGGAAAGC TCCTATTCCT GAGAAAGTTG TTGTTTTTAT GCAACAACAT
GCAGGAAGTC CCGCAAAACC TATTGTTAAT CCCGGTGATA AAGTTAAAAC TGGTCAGGTT
ATAGGTGAAC CAACGGGATT TATTTCCTCG TATGTTCATT CACCAGTTAC TGGAACAGTA
ACAGATGTAA AAAAAGTTAC AAATGTTATT TTTGGTAAAG CAGTCGAGGT TGTTGAAATC
GAGAGAGAAG GAGAAGATAA ATGGGAGTTG TTACCACATG GTAATTTTGA AAAATTTTCT
CCAGAAGAGT TGGTTGATAT AATAAAAAGA GCTGGAATTG TTGGGCTTGG TGGTGCCATG
TTCCCAACTC ATGTGAAATT AACTCCTCCA AAAGATAAGA AGATAGATAC TTTGGTTATT
AACGGTGCAG AGTGTGAACC TTATTTGACC ATTGACCATC GTATGATGCT TGAAAAATAT
GAAGAGATAC TTATAGGAAT AGAAATTGTG AAAAAAATTC TTGGTATAGA AAAAGCAATT
ATTGGAATTG AGGACAACAA ATTGGATGCA ATTGATCTAT TAGAAAACAA ATGGAAAGGA
AAAGTAGATG TAAAAGCTTT AAAAACAAAA TATCCGCAAG GTGCTGAAAA ACAATTAATA
TATGCCACTA CCAATAGGAA AGTGCCTAGA GGAAAACTTC CTATGGATGT AGGTGTTGTG
GTATTAAATG TAAGTACATT ATTTGCGATA AAGGAAGCGG TTATAGACGG TAAACCGTTA
ATTGAAAGGG GCTTGACTGT TACAGGTGAA GCAATTAACA AACCAGGAAA TTGGTGGGTA
CGAATAGGTA CACCGATATC TTGGGTTATA GAAAGATTAG GAGAAGGTTT AAAAAGTGAA
GCGGAAAATG TAAAGGTTCT TATGGGTGGA CCAATGATGG GGATTCCAAT AAATAATATT
GATACTCCAT TGGTGAAAGG TAACAATGGA ATTACAACGA TTATACCAAA AGAGCAAAAG
AGTACATTTT GTATACGCTG TTCATATTGT GTAAATGTGT GTCCAATGGG CTTGCAACCT
TATCTACTTG ATTTACTTGG AAAGAAAAAG AGATACGATG AAGCAGCAAA AATAGGTCTT
TTAGATTGTA TAGAATGTGG TTCTTGTACA TACATTTGTC CTGCTAAAAT AGAGCATGTT
AAGACAATAA AATTGACTAA GAAAGTATAT AAAGCCCTGA GAGGGGGGAG AAAATAA
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| Protein sequence | MRLSTFLGGV HPPENKHLSK DIPIRKAPIP EKVVVFMQQH AGSPAKPIVN PGDKVKTGQV
IGEPTGFISS YVHSPVTGTV TDVKKVTNVI FGKAVEVVEI EREGEDKWEL LPHGNFEKFS
PEELVDIIKR AGIVGLGGAM FPTHVKLTPP KDKKIDTLVI NGAECEPYLT IDHRMMLEKY
EEILIGIEIV KKILGIEKAI IGIEDNKLDA IDLLENKWKG KVDVKALKTK YPQGAEKQLI
YATTNRKVPR GKLPMDVGVV VLNVSTLFAI KEAVIDGKPL IERGLTVTGE AINKPGNWWV
RIGTPISWVI ERLGEGLKSE AENVKVLMGG PMMGIPINNI DTPLVKGNNG ITTIIPKEQK
STFCIRCSYC VNVCPMGLQP YLLDLLGKKK RYDEAAKIGL LDCIECGSCT YICPAKIEHV
KTIKLTKKVY KALRGGRK
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