| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1557 |
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| Symbol | |
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| ID | 5296894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1544713 |
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| End bp | 1546266 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640769834 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001306787 |
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| Protein GI | 150021433 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3584] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCTTT TGTTATTTTC TTGTAATTAT GTGACATATG AACAATTCAG TCAATTAGAA
AATAGAGTTT ATACTTTAGA AAATATTATA CAAGAGTATG ACGATAGGAT TAGTGTTTTG
GAAAAGGATT ACAATAAGGT TTTTAATAAT CTTGAAAATA GTTTAAAAGA ATTGGAAAAT
AAATTAAAAA AGATAGATGT TAAAAAAATA GATTATTTAG ATGATTTTAC AAAAAAAATC
GCAATCCGGA TTACTAATAT AGAAAATCAA TTGAACAAGA TAACTGCAGA GCTTACTTCT
TACAATATTA GGGGAATTAT TTATAGAATA AACGATGTAG AGGGATTGGT TCAAAAGCTT
AATCTAAACG AAGTAAAGAA CATTTTAGAT GAAGCTATAG AGAGATACAA TAATGGTTAT
ATAAAGATAA TGGAATTGGA AGATAAGGTA AGAGAAATAC AGGTTGAAGT ACAATCTTTG
GGTCAGACTT TGGAGGAAGT AGATAGTATT GGTGGTAATG AAGGGAATAT TCCTGCACTA
CAAATTTTAA ATAAACTAGA AAAGATAGAT TATTTGGAGA ATACGGTTAA TGATTTGCTT
TTAAAGATTG ACAGATTTTC TTCAAGAGAG GGTTTAGAAA AGGAATTATC ACTGGTTAAA
CAGATAAATT CTGAAATAAT GTTTTTGAAG CAAAATTTTA ATAGAGAAGA TATAATAGAT
ATTTTGAAAT TAAGACAAGG GTATATTTTG TATATTGTGA GAAGTGGAGA TTCATTGTAC
AGTATAAGTA AGAATTATAA TTTGGGAAGT AATGGCGTCG AAAGATTAAT TTCGTTTAAT
GCAATAAGTG ATCCAAGAAG AATTATGCCT GGACAAGTGT TAAAAATTCC TGTAGATAAT
TTCAAGAATT TTTTGAATTT ACCTATAGAA ATAAATCCTG AGAATGTTTT AGGATATTTT
GGTGAGACAA AAAAAGGCGT TACAAATTTA GGAATAGATA TTGATGCACC TGGTAAAAAA
GTTTATCCAA TTTTAGTTGG TCGTGTAACA ATAAAAGGCG ATAATGTTTT ATATGTTGAT
CATGGAAATG GAATTCTTGG TATATATAAA GGGATTGAAA CTAATTACAA AGAAAACGAT
TGGGTAGATA TAAATAAACC ATTGGGAAAG ATTAAAAAGA TTTTTCATTT TGAATTATGG
GTGGATGGGG AACCGAAGGA TCCGTTAAAA CTTCTTTTTG AATATAAAGA GAAGTTTAAA
GTAACATTTT ATACTCCTTG GGATGATGGA AAGATACCAT ATTATCCGAC GTTTAGATTA
ACTCGTTCGG GAACAATTGC AAGAGAATGG GTAACTGCTG CTGTTGATCC GGGGATAATA
CCACTTGGTA GTTATATATA CATTCCTCAA TTTAAAAAGA TTTTTGTGGC AGAAGATACT
GGAAGTTTAA TAAGGGGTAA ACGAATAGAT ATTTATATAG AAGATGTCAA TATAGCACGT
CATTATAGTG TCAAAGACTT GGATGTATTT ATATTAAAAA ATGGAGGTAT ATAA
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| Protein sequence | MLLLLFSCNY VTYEQFSQLE NRVYTLENII QEYDDRISVL EKDYNKVFNN LENSLKELEN
KLKKIDVKKI DYLDDFTKKI AIRITNIENQ LNKITAELTS YNIRGIIYRI NDVEGLVQKL
NLNEVKNILD EAIERYNNGY IKIMELEDKV REIQVEVQSL GQTLEEVDSI GGNEGNIPAL
QILNKLEKID YLENTVNDLL LKIDRFSSRE GLEKELSLVK QINSEIMFLK QNFNREDIID
ILKLRQGYIL YIVRSGDSLY SISKNYNLGS NGVERLISFN AISDPRRIMP GQVLKIPVDN
FKNFLNLPIE INPENVLGYF GETKKGVTNL GIDIDAPGKK VYPILVGRVT IKGDNVLYVD
HGNGILGIYK GIETNYKEND WVDINKPLGK IKKIFHFELW VDGEPKDPLK LLFEYKEKFK
VTFYTPWDDG KIPYYPTFRL TRSGTIAREW VTAAVDPGII PLGSYIYIPQ FKKIFVAEDT
GSLIRGKRID IYIEDVNIAR HYSVKDLDVF ILKNGGI
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