| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1549 |
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| Symbol | prfB |
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| ID | 5296738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1539324 |
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| End bp | 1540433 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769826 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_001306779 |
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| Protein GI | 150021425 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.168139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGATT ACGAATTAAA ACAGAGAATT GATGAAGTGA AGAAAAGATA TGAAGATATT
GTAAAAGTAT TTCACCCAGA AGATAAAAAA AAGGAATTGG AAGAACTTGA AAAATTAATG
GGTGAGTCTG ATTTTTGGAA TGATCAAAAA AGAGCAAAGG AGATTTCTCA AAATGCTCAA
AGGATTAGAA AGATAATAGA TGATATGGTA GATATTGAGA ATAAACTTGA AGATTTGGAG
GCGGGTTTAG AACTTTTAGA AGAAGATGCA ACGTTTTTGG ATACTATAAA ACAACTAATT
GATGATATAG AGAGAAAGGT CAAAACATTC GAACTTGAAT TGATACTAAA TGAGAAGTTT
GACTCGAGTA ACGCATATCT TTCCATACAT CCTGGGGCAG GTGGAACGGA ATCGCAGGAT
TGGGCATCTA TGTTGCTTAG AATGTATATG AGATGGGCTG AAAGAAGAGG ATTTGATGTT
CAAATAGTTG ACTATCAACC GGGAGAAGAG GCGGGAATAA AAAGTGCAAT GTTGTATATA
AAAGGAGAAT ATGTGTATGG ATATCTTAAG TACGAAAGAG GAGTACACAG GTTAGTTAGA
ATATCTCCAT TTGATGCTAA TAAAAGGAGG CATACATCTT TTGCATCGGT TAATGTTATG
CCTGAAATAG AGGACGATAT TGATGTAGAA ATTAATCCGG AAGATTTGAG GATAGACACA
TATAGAGCTT CTGGTGCAGG TGGCCAATAT GTAAATAAAA CTGAATCGGC CGTTAGAATA
ACACATATAC CAACAGGTAT AGTAGTTACT TGTCAGACAG AAAGATCGCA ATTACAAAAC
AAAGAAACTG CTATGAAAGT TTTAAAAGCT AGGTTGTATC AATTAGAATT GGAAAAAAGA
CAAAAACAAT TAGAGGAAAT ACAAGGAGAG CTGAAAGATA TTTCATGGGG GAATCAAATT
AGATCTTATG TTTTTCAACC GTACACAATG GTAAAAGATC ATAGAACCAA TGTAGAGACT
GGTAACATTG ATGCAGTAAT GGATGGAGAT ATAGATATTT TTATTGAAAG TGAATTAATT
TTCTTTGCAA AAAGTAAAAA CAAAAAATAG
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| Protein sequence | MIDYELKQRI DEVKKRYEDI VKVFHPEDKK KELEELEKLM GESDFWNDQK RAKEISQNAQ
RIRKIIDDMV DIENKLEDLE AGLELLEEDA TFLDTIKQLI DDIERKVKTF ELELILNEKF
DSSNAYLSIH PGAGGTESQD WASMLLRMYM RWAERRGFDV QIVDYQPGEE AGIKSAMLYI
KGEYVYGYLK YERGVHRLVR ISPFDANKRR HTSFASVNVM PEIEDDIDVE INPEDLRIDT
YRASGAGGQY VNKTESAVRI THIPTGIVVT CQTERSQLQN KETAMKVLKA RLYQLELEKR
QKQLEEIQGE LKDISWGNQI RSYVFQPYTM VKDHRTNVET GNIDAVMDGD IDIFIESELI
FFAKSKNKK
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