Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1548 |
Symbol | |
ID | 5296737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1538403 |
End bp | 1539305 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640769825 |
Product | hypothetical protein |
Protein accession | YP_001306778 |
Protein GI | 150021424 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.199847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA TTTTCGCTTT GTTACTTGTT GTATTTTCGG TAATTTCCTT TTCAGAAATT TCTATAAGTT TTGGGATATC TTTTGGGAAT TTAGAAGGTT TAAGTGACTA TTCTTTAGTT ATAGTAACAG GAGAGTCTTT CATGGATGTG TATGTTGATG GAGAATATAT GGGTCAAACT GATATTTTTG GGCAGTTTAT TGTAACTTTT GAGGAAAGTG GCTATCATTT TGTTGAAGTG CAATCGGAAG ACTATATTGT TTTTTCAAGA ATGATTTTTA TTCGAAAAGA GGGGGTAGTT TTAAAGTTAA AACCAATTAA AGCTGGTAGA ATAGTTGTAT TTTCAAATGT TTATCCAATA AATGTGTATA TAGATGGAAT TTTTTGGGGA GAAATAAAGA ACGAGAATGA GGAGTTGAAG CTACCCATTG GAGAATATAA AGTAATGTTT TCATCACCTG GATATGAAAA GTTAGAAAAA GAATTAGTAA TAGATTTTAA AAGAGTAACA CCTGTTGAAC TTTTTTTAAA AAAGTTACCT TTGGAGATGT ATTTAAGAAG CGATTATAAT GAATTTTCAC CGAATGGTGA TTGGTATAGA GATAATTGGG AATTAGAGAT TTTGTTGACT ACTTTTTCAA CGGTTACAGT AGATATATAT AAAGGGGATT TAAAAATTGA TAATTATGTT TTTTCAGGTG TTCCAGGTGT AAATTTGTTT AAATGGAATG GTGTGAAAGA AGAAGGAGAT TACTTAGTAA AAGTTAGTGC ATATGATGAA GATGAGATTG TAACAAAGAG TACTAATGTG AAAATAAATA TGAAATATAC GTATTTGAAA GAGTTGGTTA TTATAAGTTT ACTATCCTTA GTTGGTGTTA TTGTATATTC AATTGTGAAA TAG
|
Protein sequence | MKKIFALLLV VFSVISFSEI SISFGISFGN LEGLSDYSLV IVTGESFMDV YVDGEYMGQT DIFGQFIVTF EESGYHFVEV QSEDYIVFSR MIFIRKEGVV LKLKPIKAGR IVVFSNVYPI NVYIDGIFWG EIKNENEELK LPIGEYKVMF SSPGYEKLEK ELVIDFKRVT PVELFLKKLP LEMYLRSDYN EFSPNGDWYR DNWELEILLT TFSTVTVDIY KGDLKIDNYV FSGVPGVNLF KWNGVKEEGD YLVKVSAYDE DEIVTKSTNV KINMKYTYLK ELVIISLLSL VGVIVYSIVK
|
| |