| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1544 |
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| Symbol | |
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| ID | 5297393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1535597 |
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| End bp | 1536904 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769821 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001306774 |
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| Protein GI | 150021420 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.144945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA TTGTTTATAT TGAGAAAATG GCATATGGTG GTAATTCGAT AGGGAAATTA
CCGGGTGGAA AAATAGTCTT TGTCGAAGGA GCATATCCTG GTGAACTTGT TGAAATCACA
ATTTTGAAGG ATAAGAATGA TTATGCGATA GCAAAAGTTG ATAAAATTTT AGAAACTATT
CCTGAAAGAA GTACGCCAAA ATGTCCATAT TTCAAAGAAT GTGGAGGATG TGATTTTTTA
GATTTAAAAT ACGATAAACA GTTAGAGATA AAAAAACAGG TTTTTTTGGA ACAACTTTTA
AGAATTTCGG GATTAAATAT TAAAAATGTG GAAATTGAAA GGAGTAATTT TGAATATAAC
TATAGGTTGA AAATGGAATT TTCCGTGACT AGGAATAAAA AATTAGGGTT TAAAAGAAAA
AAAAGTAATA GGGTTGTAGA AATAAAAAAG TGTTTAATTG CACCTAAGCC TATGAATCAA
GTTTTGGATG TTCTTCCAGA AATTTTAGAT GCTTTTAACG TTTCAGTGTA TAATGGAAGA
AATGGAGTTT TGAAAAATAT AGTATTAAGA TATTCTCCTA GGGGAGAGTT GATGGTGGTT
TTTGTTACCA AGATGGAAAA TTTTAAAGAT GCAAAAAAAA TTGCAAATGT TTTAAGCAAA
CAAGTGTCAT TAATAACTTC GGTGGTTCAT GTTATGAATA GTAATGATAA AGTAGTATTG
AGAGGACCAT ATAGGATTTT AAAAGGTGAA GGTGTTATAT CATATGAGTT TAGTTGGGAA
AAATTTCAAG TACCTCCAAC TGCATTTTTC CAAAACAACT TTTATGTAAC GGAAAAAATG
ATAGACTATT TGACTAAGAA TCTAGATTTG AATGGTAATG AAGTAGTTTT GGATTTGTTC
AGTGGTCTTG GGACATTTTC CATTAGACTT GCGTTATTGT CCAAATTTGT AGTTGCTGTG
GGATCAAATC ACGTTTCAGT AAAAGCAGGA CGTGCAAATG CAAACATTAA CGGATTAAGG
AATATTAAAT TTATAGAATC TGATGCTTAT GAGTTTTTAA AAAATTCAGA GAAAAATTTT
GATGTGTTAG TAGTTGATCC ACCTAGGTCT GGTTTGGGAA AGGAAATGTG TAATGAAATT
TTGTTACGCA AACCGGAGAA GATAGCTTAT GTGTCTTGTA ATCCGTCGAC TTTTTCAAGG
GATTTAAAAA TGTTGATGGA ATTGTATGAG ATAAAGAGTA TAAAGTTATT TGATATGTTT
CCTCAAACTT ATCACATTGA ATCAATAGCA ATATTAGCTA GAAAATAA
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| Protein sequence | MKEIVYIEKM AYGGNSIGKL PGGKIVFVEG AYPGELVEIT ILKDKNDYAI AKVDKILETI
PERSTPKCPY FKECGGCDFL DLKYDKQLEI KKQVFLEQLL RISGLNIKNV EIERSNFEYN
YRLKMEFSVT RNKKLGFKRK KSNRVVEIKK CLIAPKPMNQ VLDVLPEILD AFNVSVYNGR
NGVLKNIVLR YSPRGELMVV FVTKMENFKD AKKIANVLSK QVSLITSVVH VMNSNDKVVL
RGPYRILKGE GVISYEFSWE KFQVPPTAFF QNNFYVTEKM IDYLTKNLDL NGNEVVLDLF
SGLGTFSIRL ALLSKFVVAV GSNHVSVKAG RANANINGLR NIKFIESDAY EFLKNSEKNF
DVLVVDPPRS GLGKEMCNEI LLRKPEKIAY VSCNPSTFSR DLKMLMELYE IKSIKLFDMF
PQTYHIESIA ILARK
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