| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1543 |
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| Symbol | |
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| ID | 5297489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1532291 |
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| End bp | 1535581 |
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| Gene Length | 3291 bp |
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| Protein Length | 1096 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640769820 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001306773 |
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| Protein GI | 150021419 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00918394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGGGTTT TAACAAAGTA TATCTTAAAG CTTTCAATAG GTCCTTTTAT AATGGGTGTT
GCTGCATTTG TTTTGTTTGC AAGTGTTGAG TTACTTTATC AACTATCGGA TATAATTGTA
AGGCATAGGG TTGGTATACT TAAACTTTTT GAGTTAATAT ATTATAATCT TCCGTATTTT
GTTTCTATGG GAATACCAGT CGGTGTTTTG TTTTCTATAT TTTGGGTTTT GTCACAACTT
TATAGTTCTA AAGAAATTAC TGCTATGCTA GTCCATGGAA TTCCATCAAG AAAATTGGTT
TATCCATTCT TTTTATTATC TGTTTTGTTT GGCCTTTTTG CATTTTATCT AAATGATCAA
ATGGTTCCAA CATTTAACCA CAAGGCAATG AAGACTATTT CAAAGTATGT GTATAAAAGA
CCGGAGATTT CTATTAGGGA AAATGTCTTA ACAAAAATAG ATGAATCACA ATATTTTTTT
GTGAAAAGAT ATGATCAATC AAGTGGGATC TTGTACGATG TAGTCCTCTT TCAACATATT
CAAGGAGAAG AACGTATAAT TACAGCAGAG AAGGTTCAAA AAGATGAAGG AAAGTGGTTT
TTGATAAACG GAAAAATGTA TGTAACAGAC AAAGATGGTT TTCTAAAGTT TGATGTAAAT
TTTTCGAAAA TTTCTTTGGA TTTAAAGGAT GATTTAGAAA GTCTAATGAG AGTTGGAAAA
TCTCCACGAG ATATGACTGG CGATGAATTA AAAAATAAAA TTAAAACTTT TAGGAAGTTG
GGGGTAGATC CTTCCCCGTG GATTGTGGAG TTACATGGAA GGTATGCGAA TTCTGTTGGG
CCCTTTATAA TAACTATTCT TGGAGTTCCA TTGTCTTTGT TATTTGGATT AAAAAGTAAA
TCCTGGAGTG TGATTTTTAC CTTTGCTATA GTTATTTTGT ATCAGGGTTC TGGTGCTTGG
ATTTCTGCAA TGGGTAAAGA GAATCTTTTA AATCCAGTGC TTGCAGCATG GTTTCCAAAT
TTAGTATTTA TTTCGGTGGG TTTATTTTTG TTTTTAATGC TTGATACTCC TTTTGCTTAT
AAGTTAAGAG AGCTGTTATC AAAATTTATG ATAGTTATTT TTTTAATTGT AATATCTACT
AATGTTTTTT CAAATACAAT TACATTGGAA GCTTCAAATG TTATTTATAA AGATAATTTT
ATACACGCAA AAGAGAATGT GCGTATTTTT TGGGATGAGA ATATTTTAAC TTCTAGTGAA
GCGACGATTT TAGTGGAAAA TTCAAAGGCA AAAATTTTAG AGGCATATGG AAATGTGAAA
TTTAATAAAG AAGGAAAGGT TTATAATGCA AAGTACGTGA AATATTTTTT TTCTGAAAAA
AAATCATATG CCGTACGTGT AAGAGGAGTT GAAAAATATA AATCTAAAAA AGGTAAAGTA
GATTTGTATT TTGGTGCGGA AAACTTTGAG AAAAAAAAAG GTTATATTAA TCTAAACGAA
GCATATATTA CAACATGTGA ACTTGAAAAA CCACATTATA GAGTAGAAGC GTTAGATGTT
TATATTTATG AGGATAGATA TCTAGTAGCT GAAAATTCCA TGTTATTTTT GTTTGAATTT
CCTTTTTTTC CATATCCTGT GTATTTTTCA AGTTTGAGTG AGGATTCCAA ATCTCCATTT
TCATTTTCAT TTTCAATAGA TAGCAAATTA AATTTTTCAA CTCGTCAAGA GTATAGCTTA
TACGTGGATA ACTATTTGTT AAGTACCACT TTTGAAACAG GGGAAGGTTC TAATTTGATA
TTTACAATTT TAGATGGTAA AGAAAAAATT TTTTATATTG ATTACGGAAA AAAATATCTT
TTGGTGGATT TAGGATATTT AGAATATAAC ACTAGATGGG ATTTAAAGAC AACAAATTTA
AAGCTAACAT TTTTCCCGTT TTACTATTCT GAAAGTTTAA ACACATTATG GTTTAAAAGA
ATAGGAGTAT CATTTAAGAC TAAAAGTTAC TTTTTTGACT TAAACTTAAA TAGAAATGAT
AAGGAATTTT CAATAAATAA CGTATTTAGT TTAAGTGGAT TAAAGAAAGA TTTAGATTTT
ACAGAGCTTT ATATTAGCAA TTTTAGATTT ATAAGTTCAG TTAAAAAAAT TAGCGAAGAG
ATCTTATTTG ATGAAACGGG AAGTTATAAT GTTTCTTTTA AAGATAAATT TTACACTACA
AATTTCAGTG GAAATTTAAA GAATGAAAGT TATGTAAGTA AAATATTTCA TAAGTTTAAT
TTACCTTTTG AATATAAGAG TGATTTTTTT GATGTTAATT TTGAATATAA CTTTGGGTTA
AGTTGTTACA ATGCTTTAAC TGATAAATAT TACTTGAGAT TGGGATTATA TGATGCCTAT
AAATTATCAG GCAATCTAAA ATTTGAGGTA CTTGAACTCA AGCCTGAGTA TGGATATAGA
AAAAATTTCA GGGATGAGGC AACAAATACG GAATATAATA AATTCAGTAT AAGGCTTTAC
GTAAAGAGCA AATTTCTCAA TTTTTTATTA ACACAAGGGT ATGATTTTTT TTATAATAAG
ATGTTAAATG ACAAAATTAT GGTAAAGTTT TCTTGGAATA AATTTTTTTT ACAGGCTGAT
ACGGAATACG ATTTCAAGTT AAAAAAACTG AACCCTTCTT CTGTGAAGAT TTCGTATGTA
GATTCATCTA TCCCTTTAAA TTATAGTGCT AATTTTAAAT ATTACCATAT GGAACAAATA
CCAGTTAGGG AAATTACTCA TTTGGTAACT TTTCAGAAAT TAAAGGGTCG TGTACGTCAA
TCGATAGAGG AAAATTACAT AAAAAATGCG TATTTTAAGG GAAGTTTTTT TGTAAATAAA
TGTGAGAATA TTTTGGAATT AAATTATCTG AAAAAGAGCA AAGATTCAGA CCCTTCTTAT
ACATTGAATT ATAAATTAAA GAGTGGTGAT GATACATTTT TGTTGGGTTA TAAAAGCAAT
TATAAGTATT TAGAAATAGG AGTTAATTTG AAATCTATTG ATCCTGGATT AATATTAGAT
GCGGTGTATA ACTTTGAAAC TGAAAAATTT AAGGAACTAA AGATATCAAT TCTAAAGAGG
CTTCACCATT GGATGTTTGA ATTTTCGTCA GAGTTCGAGT TTAACGATGA TGGAATCTTT
GATTTAGATG ATGTGAATAA ACTTTCAGTA CTGTTTTATA TAATAGAATT TGAAGATAAA
TTTTTTGGAT GGGACTTTAA AGAAAATAAA CCTAATATTG GCTTATTCTA A
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| Protein sequence | MRVLTKYILK LSIGPFIMGV AAFVLFASVE LLYQLSDIIV RHRVGILKLF ELIYYNLPYF
VSMGIPVGVL FSIFWVLSQL YSSKEITAML VHGIPSRKLV YPFFLLSVLF GLFAFYLNDQ
MVPTFNHKAM KTISKYVYKR PEISIRENVL TKIDESQYFF VKRYDQSSGI LYDVVLFQHI
QGEERIITAE KVQKDEGKWF LINGKMYVTD KDGFLKFDVN FSKISLDLKD DLESLMRVGK
SPRDMTGDEL KNKIKTFRKL GVDPSPWIVE LHGRYANSVG PFIITILGVP LSLLFGLKSK
SWSVIFTFAI VILYQGSGAW ISAMGKENLL NPVLAAWFPN LVFISVGLFL FLMLDTPFAY
KLRELLSKFM IVIFLIVIST NVFSNTITLE ASNVIYKDNF IHAKENVRIF WDENILTSSE
ATILVENSKA KILEAYGNVK FNKEGKVYNA KYVKYFFSEK KSYAVRVRGV EKYKSKKGKV
DLYFGAENFE KKKGYINLNE AYITTCELEK PHYRVEALDV YIYEDRYLVA ENSMLFLFEF
PFFPYPVYFS SLSEDSKSPF SFSFSIDSKL NFSTRQEYSL YVDNYLLSTT FETGEGSNLI
FTILDGKEKI FYIDYGKKYL LVDLGYLEYN TRWDLKTTNL KLTFFPFYYS ESLNTLWFKR
IGVSFKTKSY FFDLNLNRND KEFSINNVFS LSGLKKDLDF TELYISNFRF ISSVKKISEE
ILFDETGSYN VSFKDKFYTT NFSGNLKNES YVSKIFHKFN LPFEYKSDFF DVNFEYNFGL
SCYNALTDKY YLRLGLYDAY KLSGNLKFEV LELKPEYGYR KNFRDEATNT EYNKFSIRLY
VKSKFLNFLL TQGYDFFYNK MLNDKIMVKF SWNKFFLQAD TEYDFKLKKL NPSSVKISYV
DSSIPLNYSA NFKYYHMEQI PVREITHLVT FQKLKGRVRQ SIEENYIKNA YFKGSFFVNK
CENILELNYL KKSKDSDPSY TLNYKLKSGD DTFLLGYKSN YKYLEIGVNL KSIDPGLILD
AVYNFETEKF KELKISILKR LHHWMFEFSS EFEFNDDGIF DLDDVNKLSV LFYIIEFEDK
FFGWDFKENK PNIGLF
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