Gene Tmel_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1536 
Symbol 
ID5296810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1527574 
End bp1528458 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content31% 
IMG OID640769813 
Producthypothetical protein 
Protein accessionYP_001306766 
Protein GI150021412 
COG category[S] Function unknown 
COG ID[COG1578] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.637691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGCAA CAAGTAAATG TTTAACTTGT CATGTTGAAC AAGCTCAAAG AATAATTGAT 
AAATTTGTCA CATCTGAACA GGAAAAATGG CTAATATTAA ATGAAGTTTT AAAAGAGCTG
GCTACTGTAG ATTTCGGTGT TATGCCCATT GATATAGCAG AGATTCTATA CAAAAAGCTA
GAAATTCTTT TGAAAAAAGA AGATCTTTAT AAATTGGAAA AGGAAAAATC TAATAAAATA
GCGCTTTCAC TTTATAACGA TTTCAAATTA AAAGTCATGG ATAGCTCTGA CCCTTTGTAT
GAAGCCGCAA AGCTTGCAGT TGCTGGTAAT TTAATAGACT TTGGAGCTTT AAATAATTCT
CCAGAAGAAA TGTTTGAAAA GATAAACGAA CTTTGGGCAC AGCCATTTTC CATTGATGAT
TTTGAATATT TTAAAAAAGA CATATCGAAT TCCAACAACC TTCTTTACAT TGTAGACAAC
GTTGGAGAAG CAGTATTTGA TATGTTGTTT ATAGAGACAA TTAAACAACA TTACAATGAT
CTTAATATTT CTGTTGCTTT AAAAGGTTAT CCGATAATAA ACGATGCAAC AGTGGAAGAT
GCTCTTTTCA TTGGGCTAGA CAAATTTGCA AACCTAATTA ATACTGGACT AAGCACCCCC
GGTACAAATC TTGAAAAAGC AAATCAAGTA TTTAGAGATG CCTTCTTTGA ATATGAAATT
ATTTTGGCAA AAGGTCAGGG AAATTTCGAA GGACTATCCG ACATAAAAAA GAACAACATT
TATTTTGCAT TAGTTGCAAA ATGCAAAGTA ATATCAGATT ATATCAAAGT AGCTCAAGGC
TCAAAAATAT TTATGAATTC AAAAAGAATT CACCAAGTTT TATAA
 
Protein sequence
MRATSKCLTC HVEQAQRIID KFVTSEQEKW LILNEVLKEL ATVDFGVMPI DIAEILYKKL 
EILLKKEDLY KLEKEKSNKI ALSLYNDFKL KVMDSSDPLY EAAKLAVAGN LIDFGALNNS
PEEMFEKINE LWAQPFSIDD FEYFKKDISN SNNLLYIVDN VGEAVFDMLF IETIKQHYND
LNISVALKGY PIINDATVED ALFIGLDKFA NLINTGLSTP GTNLEKANQV FRDAFFEYEI
ILAKGQGNFE GLSDIKKNNI YFALVAKCKV ISDYIKVAQG SKIFMNSKRI HQVL