| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1522 |
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| Symbol | |
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| ID | 5296980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1508694 |
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| End bp | 1510703 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640769799 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001306752 |
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| Protein GI | 150021398 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.707162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TAATACTATT TTCCATTATA CTTTTTGTTT CGATTCTTTT AATTTTTTTC
AAAGGAAAAA TATATACAGG CCCAGAAGTT TTTCTTCCAG GTTTCAAATA TAACCAAAAG
ATTGAAAATA TAGAAAATTC AAATATTAAA AATTTTATTA AACTAGGTAA AGACTTTAAT
GATGGCAATA CTATTTTCTT AATCCTATAC TCAGAAAATA CCTTTTTCAA CAAACCCTTA
ACAGAAAAAT TGATAAATTT AGTAAAAGAA CTAAAAAAAG ACTACATTAG CACAATTATA
AGTCCTGTAA ACATACCAAA AATTGGTTTT TCAAGAGAAA CCTATATAAA AGACAACATT
CTACAAAAAG ATATACTTAG AGATAACTCT GCAAAAAACT TTCTAAGCAA AGATGGAAAA
TATTGCATTG TTAATCTCAC CTTCAAACCA GAAACAAATT CTAGAGCGTA TATTAGTCAA
ATAGAAAATA TAGTAAAAAA ATACTTCAGT AAGTATTATT TATTCGGTGA ACCAGTAATA
GACAGTTACC TTTTTAAAGA GTTAATTAAG CAAATGTACA TATATCCGTC ATTCATGTTT
ATACTAATAC TTTTATTTTT CTATTACCAA ACCAAATCTT TAAGAACTTC ATTTTTTATA
CTACTTGCAC CTGTAATTTC ATCAATAATA ACCATTTCAC TATTATTTAT TACTGGTAGA
CCCTTAAACA CACTTACAGT AATGATATTT TCGTTTTTAT TAATAATAGG CTCTGGATAT
GGTCTTCATT ATTATAACTC TTTCTATAAA AACAAAGATT TTTCTAAAAC AAAAAAACAT
ATATTAATTC CCATTCTATT ATCTATGCTA ACTACTGCCG CAGGATTTTT ATCTTTCCTT
TTTGTAAAAA TAGAAGCATT TAGGGAACTT GGTGTTTTAG TTTCAATTGG ACTTGCTATA
AATGTAGTTA TAATTTTTGA ACTTTCACCG TTAATCTTAA AATTAGAAAA AAATCCCCCT
GAAAGATTTG GAATAAAATA TCTTGGAGAC AACTTTGCAA AAATTTCATT AACAATATTC
ATAATAATCC TAATTTTTTC ACCATTTATC ATTAAAAACA TTTCAATCAA ATCAGATATG
CTATCATATT TTTCAAAAAA TTCGGAACTT GGAAAAGCTA CCGAAATAAT GGAAAACATT
TTTAATTTCA GAGAACCCAT CTCACTTGTT ATAGAAAAAG ACACCGCATT TTTAGCAACA
GATAACAAAA AATTGGAAAA TTTCTCAAAA AAATTGAAAG AATCTAAATT TGTTTCAAAT
GTAAATTTTC CATTTGAAAT ACCCATCCCT ATTCTTTATA ACTTTTCAAA GACAGAACCT
ATCTTAAAAT ATTATATTTC CGGAAAAGAA AAAATAAGAC TCATAATCTA CCTAACAAAA
GAAGGATATA GCAATATGGA TTTTGTATTA ACACTAATTA AAAAATATAT ACCCTATAAG
AACTTTTACG TAGCAGGTTC TGCACTTATC TGGAATGATA TAAATAAAAG CATACTCTCT
ACCCAAATAA AATCCATTAT ATCTGCAAGT ATTATAATAT TTTTCATGGT TTTAATAATA
TTCCGCTCAC TCAAAACATC AATAAGTATA ATAATTCCAA TAAGTTTTAC TACTATTTTT
AATTTTATTT TTATGTCTCT CTTAAAAATA AATCTAGATA TTTCAACTTC TATTACATCA
AGCATTTTAA TGGGACTCGT AATTGATTAC TCAATACACA TTGCAAATGA TGAAAGAATA
ACAAAATCAT CAAATCAAAC AGTTATAAAC GTTGGTCCAC CTATACTTAC AAATGGTCTG
GGATTAATAC TAGGGTTCTT AGTTTTACTT TTCTCACCAC TAAAACTATT TAAATCAATT
TCTCTTTTGA TAATTTTTGG GATATCAATA GGTTTATTTT TCACATTAGT TATCCAGCCA
TTTTTGCTAA AAATAACATT TAAAAAGTAA
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| Protein sequence | MKKIILFSII LFVSILLIFF KGKIYTGPEV FLPGFKYNQK IENIENSNIK NFIKLGKDFN
DGNTIFLILY SENTFFNKPL TEKLINLVKE LKKDYISTII SPVNIPKIGF SRETYIKDNI
LQKDILRDNS AKNFLSKDGK YCIVNLTFKP ETNSRAYISQ IENIVKKYFS KYYLFGEPVI
DSYLFKELIK QMYIYPSFMF ILILLFFYYQ TKSLRTSFFI LLAPVISSII TISLLFITGR
PLNTLTVMIF SFLLIIGSGY GLHYYNSFYK NKDFSKTKKH ILIPILLSML TTAAGFLSFL
FVKIEAFREL GVLVSIGLAI NVVIIFELSP LILKLEKNPP ERFGIKYLGD NFAKISLTIF
IIILIFSPFI IKNISIKSDM LSYFSKNSEL GKATEIMENI FNFREPISLV IEKDTAFLAT
DNKKLENFSK KLKESKFVSN VNFPFEIPIP ILYNFSKTEP ILKYYISGKE KIRLIIYLTK
EGYSNMDFVL TLIKKYIPYK NFYVAGSALI WNDINKSILS TQIKSIISAS IIIFFMVLII
FRSLKTSISI IIPISFTTIF NFIFMSLLKI NLDISTSITS SILMGLVIDY SIHIANDERI
TKSSNQTVIN VGPPILTNGL GLILGFLVLL FSPLKLFKSI SLLIIFGISI GLFFTLVIQP
FLLKITFKK
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