| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1521 |
|---|
| Symbol | |
|---|
| ID | 5296979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1507462 |
|---|
| End bp | 1508643 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640769798 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001306751 |
|---|
| Protein GI | 150021397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAT ATATTATTGT TATTTCAGTA ATTGTTTTTT CTATTTTTGT GTTTTCAAAC
GTTCCAATTA GTATTGGAAC TATTGAAAGA AATAACGAAA AATATTTTGT ATATGAATTA
AGTCCAGAAT TTTCTCTTGG TCCTGTAACA GTGGGGATAG GTTTTACAGT TTATGCTACA
GATGTTGTAT ATGGACAACT TTACTATGGA GTACCTTCAT CTACACCTAG TACAAATATA
ATTAATGCAT TCGTGTTAAA CACGTTGGGA TTTAAAGCAA ATGGCTTTGA ATTTCGTTAT
GGAAAGACTG TACCTGTCAC TTTAGCTTTA GGTTTTAATA TGAGAAGGTA CATTAATGAG
AACACTAGGG CTTTTGATGT AAAGTTTAAA CCGGGAAATT TTGAAATTTA TGCACATTTG
CCATATGAGT TAACAAAGTT TGTGCCGTTT GAATTTGTTC AATCTGATAG TATATATTTT
GGAAGTTTGA TGTATGATAC TAGTTTCTTG GATTTTCAGA TATACGGAAT TACAGATACA
GCTGCAACAA AAACTTATTT GTTTAATAGT ACCTCTACTC CTGTAAAATA TGCTGGAGGT
GTTGCAACTT ATATACCATT TGGATTTTTA AAACTTGGGT TTGAATATGC GCTGCAATCG
GATGAGAAAT TTTCATCACT TGGTAATGGT ATATTTGCTG GAGTTTATGG AAATATAGGG
ATTTTGGAAC CTATAGGTGG AATTTATTAT ATGCAAAATG GATATATTCC TTTCCTTTTT
GGAAAAAATT ACAACGAAAA GAAATATACA AATTCTTTGG AAGGTTTAAA AGATATAAAA
GATAAAGCGG GATATTTTGT TGGAGTAACG ATTGATTTAG AACCATATGG AAATGGAGAA
TTTTATGTTT ATGGAAGTCT AGATGGGGCA ACACCAACTG CTGAAGGAAA CGTGAGGATA
GTTTTACCTG AAGTGGGTAA CTTTAGTGGC TTGTATATTG ATGGGTTCTA TTATGATTCT
ACTCCATTTC AAAGTGGTGA ATTTTTTGAT GAAGATACAG ATGCTTATTT GAAGATTTCC
TATCCAATAA TTGGAGAAAA TTTTGTTGCG GGAGTTATTT ATAAATGGGA AAAGAATGAT
TGGGTAAAAA GTTTATTTGT TGGTGGATTA ACTAGCTTTT AA
|
|---|
| Protein sequence | MRKYIIVISV IVFSIFVFSN VPISIGTIER NNEKYFVYEL SPEFSLGPVT VGIGFTVYAT
DVVYGQLYYG VPSSTPSTNI INAFVLNTLG FKANGFEFRY GKTVPVTLAL GFNMRRYINE
NTRAFDVKFK PGNFEIYAHL PYELTKFVPF EFVQSDSIYF GSLMYDTSFL DFQIYGITDT
AATKTYLFNS TSTPVKYAGG VATYIPFGFL KLGFEYALQS DEKFSSLGNG IFAGVYGNIG
ILEPIGGIYY MQNGYIPFLF GKNYNEKKYT NSLEGLKDIK DKAGYFVGVT IDLEPYGNGE
FYVYGSLDGA TPTAEGNVRI VLPEVGNFSG LYIDGFYYDS TPFQSGEFFD EDTDAYLKIS
YPIIGENFVA GVIYKWEKND WVKSLFVGGL TSF
|
|---|
| |