| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1508 |
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| Symbol | |
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| ID | 5296663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1494335 |
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| End bp | 1494724 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640769785 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001306738 |
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| Protein GI | 150021384 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGAAA AATTAATAAA TATGGCTATA TCAGCAAAAA GTAATGCATA TGCACCTTAT
TCTAATTTTA AGGTTGGTGC TGCTTTGCTT ACTAAATCTG GAAAAATATA CACGGGCTCA
AATGTAGAAA ATGCTTCTTA TGGTTTAACT TGTTGTGCGG AACGTGTTGC TGTCTTTAAA
GCGGTTAGTG AAGGAGAAAA GGAATTTGAC ACATTAGTTG TGGTTGGTGA TACCGAAGAA
CCTATTTCTC CTTGTGGTGC TTGTAGACAG GTAATGGCTG AATTTGGAAA TTTTAATGTA
ATTCTCGTAG GAAAGGATGG AAAAATAAAG AAAACCTCAG TAGAAGAGCT ATTGCCATAT
CATTTTAAAA AGGAGCATCT AGATAGATGA
|
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| Protein sequence | MDEKLINMAI SAKSNAYAPY SNFKVGAALL TKSGKIYTGS NVENASYGLT CCAERVAVFK
AVSEGEKEFD TLVVVGDTEE PISPCGACRQ VMAEFGNFNV ILVGKDGKIK KTSVEELLPY
HFKKEHLDR
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