Gene Tmel_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1501 
Symbol 
ID5296931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1487262 
End bp1488311 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content34% 
IMG OID640769778 
Productvon Willebrand factor, type A 
Protein accessionYP_001306731 
Protein GI150021377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.960229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TTGTATTTTT ATCCTTTATT ATTTTGATCT TTGCTTTTGG TTGTGTAAAT 
ATTCCAACAC TACCAAAATT AATTCCGAGT GATCCAGAAG GAGTCACAAA ACCATCTCCT
GCGTCTTACA CTGACTTTGA TTTTTACCTA ACAATAGACA AAAATCCATT CCTTGTTCCT
ATCTCCGTTC CAGATTATGT CAGGTTAAAA ATTAATATTC CCGACGTACA AAATTTAGAA
GCAAATGAAC TAAAGGTTTT TGAAGATGAT AAAGCTCAAG GTTTTCTGCT TTTCAAAGAA
ACTGAAACAA GAAATCAAGT AGACATAATG ATTGTATTAG ATACAACTGG AAGTATGTAT
AATGCAATTG AAGGCGTTAA AAACAGCGTA CAAAATTTAA TTGAAACTTT ACAAGCAAGT
GGTTTGGATG CAAAGGTTGG AATTATACCT TTTGATGATG CAGTTCCATC CAAAGATATT
ACTCTTACAC CTAATTGGCT TGATCTTTCA GATGCAGGAA GTGCAAAAGA CTTTGTTTCA
AATATAACAG CGTATGGAGG GGCTGATTTT CCCGAAAATC CATATGCAGG TATAATGTAT
GCGTTTAACA ATGCTTCTTG GCGAGCATCT TCTCAAAAAA TCATTATTTT AATTACAGAT
GCATCAGCAC ATTATAAATC TGAAACATAT CCAGGAGATG CTGAAGGGGA AACATTATAC
GACAAAGATA AAGTAATCGA CACAATTCAA GGGTTTGTAA CTGTTCATGG TGCATTTATA
CCGGGCTACT ATTATTCTTC AACGGATTCA GAAGACTTTT CCGCACCTGA AGACCCAAGA
GAAATAGTAG TGGAAACTGG TGGAATAATA AATTATACAG ACAGTTCAGG AAACGTTGAT
TTAACAAACA TTGGATTAAT AGAGTACATC TCTTCAAGCT GGATTGTGGC ATTTGAAAGT
GATTCTCCAA ATGCAACCCA TACAATAGAA GTATTTATAG AACACGATGG TGCAAAAGGT
TATAAAAAAC TAGAAAATAT CAACTATTAA
 
Protein sequence
MKKIVFLSFI ILIFAFGCVN IPTLPKLIPS DPEGVTKPSP ASYTDFDFYL TIDKNPFLVP 
ISVPDYVRLK INIPDVQNLE ANELKVFEDD KAQGFLLFKE TETRNQVDIM IVLDTTGSMY
NAIEGVKNSV QNLIETLQAS GLDAKVGIIP FDDAVPSKDI TLTPNWLDLS DAGSAKDFVS
NITAYGGADF PENPYAGIMY AFNNASWRAS SQKIIILITD ASAHYKSETY PGDAEGETLY
DKDKVIDTIQ GFVTVHGAFI PGYYYSSTDS EDFSAPEDPR EIVVETGGII NYTDSSGNVD
LTNIGLIEYI SSSWIVAFES DSPNATHTIE VFIEHDGAKG YKKLENINY