Gene Tmel_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1498 
Symbol 
ID5297143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1484700 
End bp1485077 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content28% 
IMG OID640769775 
Productribosome-binding factor A 
Protein accessionYP_001306728 
Protein GI150021374 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCTG AATATAGGAA TAAAAAGATA GAAAATAAAA TAAGAGGATT GATTTCTGAA 
GGGCTTCAAA AAATAAAGGT CCCAGAAATT GATGCGTTAA AGAGTTATAT TGTTATTTCA
AGGGTTTTGG TATCAAAAGA TAAAAGATTT GCGGATGTTT TTGTAAGTTA TATAGGAGAT
GCTGATAGTA GAAAAAGGGC AGTAGAGCTT CTTGAAAAAT ACAAGGGTTT TTTTAGAAAA
TATATAGCCC AAAATTTGCG GATATATACT ACTCCTGAAC TCAGGTTTAA GGAAGATATA
GGTATAGAAG AAAGTATAAG AATAAATAAA CTTTTAGATG AAATTTCTAA AAATAATAAA
AATATTTCCG ATAAATAA
 
Protein sequence
MNPEYRNKKI ENKIRGLISE GLQKIKVPEI DALKSYIVIS RVLVSKDKRF ADVFVSYIGD 
ADSRKRAVEL LEKYKGFFRK YIAQNLRIYT TPELRFKEDI GIEESIRINK LLDEISKNNK
NISDK