Gene Tmel_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1496 
Symbol 
ID5297604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1482455 
End bp1483852 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content29% 
IMG OID640769773 
Producthistidine kinase 
Protein accessionYP_001306726 
Protein GI150021372 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGTAG ATACGTTATT TTCGAGTTTT TTACATGAGA TTAGTAAGTC TAAAACAGAG 
AAAGAGGTTT ACAAATCGCT TTTAAAATCG CTAAAAGCAA TGCTAAAATA CGATAGTGCT
ATTGTTATGA AAAATGACGA GGTTGTTTTT TTTGATCCGG AAAAGTTTGA TGTGTCGGAT
TATATTGATT TTATGGAGTG GATTAAACAA AGATTGCTTC CTGCGTTTTT TTCTGATGAA
GAGGGTTATG TTGGAATAAT TCCCATAGTT AAGCAGGGAA AGATGCTTGG GAGTATAGTT
GTTAAAACTC AAAAGGAGCC TAACAATGAA CTTATGGTGT TATTACAGGT GTTTGCGTTT
TTAACGGGAA TTACATTGGA AAACTTGATT TTGATTGAAA AGATAAAGAA TTCAGAGCAA
TTTATGTTCG AAGTTTTAAA TTCTATTAAT GAAGGTATTT TCGTTTTAAA CAAAGATGGA
GAGATTGAAT TCACTAATAA ATTTGGAAAA AGGATTTTGG AAAAAGAAGA TTTGGAAGAT
TATTTCAACT TTTTCATATC AGATGAAAAT AATATTTTTA CAAAAGAATT TGGGGGGAAT
TATTTTACTA TAGTAAAAAC TAAGTTTGAT TTTTTGGGTG ATGAGAAATA TATAATTGTT
TTTAACAATG TTACTTACGA AATGGAGTTA GAAAAGTTAA AACAACTTGA TAAGATAAAG
ACAGAATTTG TTGCGAATAT TTCTCACGAG CTTAGAACGC CTTTATCGGC TGTGAAAGCT
TATACTGAAA CCCTTTTAAA TATGGAAATC GACCCTGAAA GTCAAAAAGA ATTTCTTTCA
ATAATATATG AACAAAGTGA AAGATTAGAA TCCCTTCTCA ATGATTTATT GGATTTTACT
TTAATAGACT CTGGAAGTAT GGAGTTGGAA TATAGTAAAT TTAACATTTG CAATGTGGTA
GATGATGTGT TAAAGAAGCT ATTATCTTTT GCTCAAAAAC AAGATGTAAA GTTAGAAAAA
GAGTGTGAAG ATGTTGAAAT TTCTGCGGAT AAAAGAAGAA TTTTTCAAGT TATTTATAAT
TTGGTGGATA ATGCCATAAA ATTTAATGAT AGGGAGAAAC CTGAAAGATT TGTAAAAATT
TTGGTAAAGA AGTTAGAAGA TATTCTTATT ATTGAAGTTG AGGACAATGG AATAGGTATT
CCTAAAAGTG AACAAGAAAA AATTTTTGAA AAATTTTATA AAATTGATAG AAGTTTAACT
TATGAAGTAC CTGGAACGGG GATGGGTTTA GCTATAGTTA AGGAGATTGT AAGATTACAC
GGTGGAAATA TAGAGGTTGA ATCTGAAGAG AAAAAAGGTT CAATATTTAG AGTGAACATT
CCTATAAGGA GTGAGTAG
 
Protein sequence
MNVDTLFSSF LHEISKSKTE KEVYKSLLKS LKAMLKYDSA IVMKNDEVVF FDPEKFDVSD 
YIDFMEWIKQ RLLPAFFSDE EGYVGIIPIV KQGKMLGSIV VKTQKEPNNE LMVLLQVFAF
LTGITLENLI LIEKIKNSEQ FMFEVLNSIN EGIFVLNKDG EIEFTNKFGK RILEKEDLED
YFNFFISDEN NIFTKEFGGN YFTIVKTKFD FLGDEKYIIV FNNVTYEMEL EKLKQLDKIK
TEFVANISHE LRTPLSAVKA YTETLLNMEI DPESQKEFLS IIYEQSERLE SLLNDLLDFT
LIDSGSMELE YSKFNICNVV DDVLKKLLSF AQKQDVKLEK ECEDVEISAD KRRIFQVIYN
LVDNAIKFND REKPERFVKI LVKKLEDILI IEVEDNGIGI PKSEQEKIFE KFYKIDRSLT
YEVPGTGMGL AIVKEIVRLH GGNIEVESEE KKGSIFRVNI PIRSE