Gene Tmel_1479 details

Gene Information

• Locus tag: Tmel_1479
• ID: 5296572
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1467855
• End bp: 1468475
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640769758
• Product: putative prophage repressor
• Protein accession: YP_001306711
• Protein GI: 150021357
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.734418
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATATTG GTGAAAAAAT TAAGTTTTTA AGATTACAAA AAGGATTAAC GCAGGAACAA 
TTAGGAAATA TAATAAATGT TGGGCAACGA ACTATATCCG CTTATGAAAG TGGAAAAGCT 
ACTCCTTCGG TAGAGGTATT AAAATCTCTT GCTGACTACT TTGATGTAGC GGTTGACTAC 
TTCCTTTCCG ATAAACCTGG ACAAACCGAG GTTGAGTTTG TGGATATTAA GTTCAAGAAA 
GTACCACTTT ATTCTGCTCC TGTTTCAGCT GGTAATGGCG CTTTTCCTAA CGATATATAC 
GTGTTGGGTG AAATCAATGC TATAAATCAT GATGTTGACT TCGCTGTTAA AGTTGTAGGG 
AATAGCATGG AGCCAATTGC TCCAGATGGC TCTGTTTTGT TTGTCAAGAA ACAAAATTAT 
GCTTTTAACG GAGATATGAT TGTGTGTACT TATGATGGCT GGATCTATGT TAAATGGTAT 
GTAAAACAGA ATGATAAAAT TTTGCTTCTT TCAGAAAATC CTACTTATAC TCCTATTGTT 
GTTGAGCCAA AAGATAGGTT TATAATACAC GGTGTAGTGC AGGAGGTTAT GCTGCAAAAG 
CCTAAAAAAG TTGTTAAATA A 

 

Protein sequence

MNIGEKIKFL RLQKGLTQEQ LGNIINVGQR TISAYESGKA TPSVEVLKSL ADYFDVAVDY 
FLSDKPGQTE VEFVDIKFKK VPLYSAPVSA GNGAFPNDIY VLGEINAINH DVDFAVKVVG 
NSMEPIAPDG SVLFVKKQNY AFNGDMIVCT YDGWIYVKWY VKQNDKILLL SENPTYTPIV 
VEPKDRFIIH GVVQEVMLQK PKKVVK