Gene Tmel_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1434 
Symbol 
ID5297214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1431405 
End bp1432067 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content29% 
IMG OID640769710 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001306666 
Protein GI150021312 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATATG TAACAAAAGT TCCAACACCA AAAGCTTTAA AGATTGGATT ACCAGGTATA 
ATTGAAATTA CAATGCTTAA AGAACTCGAA GGCACATATA AGACTTCAAT ATCAGATATT 
GACTTTAAAA AAAACCTAAT CTTTCTATCT ATTCCAACTT ACAAAGGACA TTTCATCCCA 
ATACCTAAAG GTACAAGAAT GAATGTAAAA TTTTTTGATA GAAGTTCGAT GTATACATTT 
TCTACTATAT CGCTTGGAGT AATTAAAAAA GATAATCTAT ACATGATCCC CGTGCCAGCA 
CCCGAATATG TAAATAAAAC TGAGAGAAGA AGATTTAAAA GAATTCCATT ATTTCTATTT 
GGAACGTTTA AATTATCCCC AAAAACTAAT GCTGAAGCTA TCCAGTTCAT GACCAAAGAC 
TTCAGTGCAG GAGGAATAAA AATTGTAACT GATGCAATTC TACATTTAGA TGATATAATA 
TATATAAATC TAAAATTAGA CGAAAATTTA CAGCTTGAAA ATCAAAAATC AAAGATAATT 
AGAGCTGATC AGAAAACAGA AGAAGGATTT CAATATGGTG TTGAGTTTTT AGATGTACCT 
ACAAATCTAG AAAACAAACT AGTAAGATTT GTATTTCAAA AAGAACTAAA AGCAAAGAAG 
TAG
 
Protein sequence
MPYVTKVPTP KALKIGLPGI IEITMLKELE GTYKTSISDI DFKKNLIFLS IPTYKGHFIP 
IPKGTRMNVK FFDRSSMYTF STISLGVIKK DNLYMIPVPA PEYVNKTERR RFKRIPLFLF 
GTFKLSPKTN AEAIQFMTKD FSAGGIKIVT DAILHLDDII YINLKLDENL QLENQKSKII 
RADQKTEEGF QYGVEFLDVP TNLENKLVRF VFQKELKAKK