| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1431 |
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| Symbol | |
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| ID | 5297292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1429618 |
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| End bp | 1430298 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640769707 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_001306663 |
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| Protein GI | 150021309 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATAGACA AAGAAAAAAT TATACAAGAA TATCTACCTT ATATAAAAAG AATTGCGTAT
GATTTAAAGA AAAATCTACC ACATAATATT GAAATTGATG ACTTAATACA AGAAGGTCTT
ATTGGATTAT TACAAGCAAT AGAACGTTAT AACCCCAAAA AAGGAGCAAA GCTAAGATCG
TATATTTTAA CCAGAGTAAA AGGTGCGATG TACGACTATC TTAGAAAGAT AGACTGGATG
CCAAAAAACC TAAGGCACGA TGTAAAAGTA GTTGAAGATG CTATCTCCAA GATGGAAAAT
TCGGGAAAAA TAATAGATTT TAATGAAATT TCAAAAATAA CTAATCTCCC ACTTGAAAAT
GTCAAAAGAG CATATAACGA AATGGTAAGA AAGCAATTTC TAATGCTTGA TGATTACCTA
ACAGAAGATC TAGAAATTAA TGAAACAATT TCTTCTTCTG ATTATACCCC AGAAGAAACG
GCATTTAAAG AAATCATAAA GGAAGAATTA AAAAAGGCGA TAAATAAATT GGATGAAAAG
GAAAAAATAA TACTAAATTT AAGATTTGAA CATGAATTAT CTTTAAAAGA AATTGGAAAG
ATATTAAACT TAACGGAATC AAGAGTTTCC CAAATTCTAA GCTCAATTAT TTTAAAACTA
AAAAAAATGT TGGGGGGATA A
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| Protein sequence | MIDKEKIIQE YLPYIKRIAY DLKKNLPHNI EIDDLIQEGL IGLLQAIERY NPKKGAKLRS
YILTRVKGAM YDYLRKIDWM PKNLRHDVKV VEDAISKMEN SGKIIDFNEI SKITNLPLEN
VKRAYNEMVR KQFLMLDDYL TEDLEINETI SSSDYTPEET AFKEIIKEEL KKAINKLDEK
EKIILNLRFE HELSLKEIGK ILNLTESRVS QILSSIILKL KKMLGG
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