Gene Tmel_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1415 
Symbol 
ID5298164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp1415711 
End bp1416334 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content33% 
IMG OID640769691 
Productformiminotransferase-cyclodeaminase 
Protein accessionYP_001306647 
Protein GI150021293 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3404] Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000124599 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTG AGAAATTAAC TTTAAAGGAA TTTTGTGATA TGGTATCTGA TAAATCACCT 
GTGCCAGGTG GAGGGGCTGT TGGGGCTATA GTTGCGGCAT TTTCTGCGGC GTTAAATCAA 
ATGGTGGCAA ATTTGACTGT TGGAAAAAAA AAGTATGAGG AATACAAAGG GGCGATGGAA 
GAAGTATTAG AAAATATGGA ATACACCAGA AATAGACTAC AAGATATTGC AGCAAAAGAT 
ATAGAAGCTT TCAATAAAGT CATGGAAGCT CTTAAAATGC CTAAGGATGA TCCAAGAAGA 
AGTGAATTGT TACAAAATGC TTTGAAAGAA GCGGCTGATG TTCCTTTTGA ACTTGCAAGA 
GAAGCCAGAA ATATTTTGAA ATATTCACAA ATTACAAGTA AATTTGGAAA TAAAAATGCA 
ATTTCTGATG CATATTCATC AGCTGAATTA GCCATTGCAT CATTTAGAAT AGCCATGTAT 
AATGTGTTAA TAAATCTTTC AAGCATAAAA GATGAAGAAT TTGTGAAAAA ATATAGAGAA 
GAGTTACAGG AGATAAGGAA TGAAGTAGAG GGAATGTACA GAAGTATTAG GGAGTTGATA 
AAAGAAAATG GCTTTGAAAT TTGA
 
Protein sequence
MNIEKLTLKE FCDMVSDKSP VPGGGAVGAI VAAFSAALNQ MVANLTVGKK KYEEYKGAME 
EVLENMEYTR NRLQDIAAKD IEAFNKVMEA LKMPKDDPRR SELLQNALKE AADVPFELAR 
EARNILKYSQ ITSKFGNKNA ISDAYSSAEL AIASFRIAMY NVLINLSSIK DEEFVKKYRE 
ELQEIRNEVE GMYRSIRELI KENGFEI