| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1412 |
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| Symbol | nusA |
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| ID | 5298192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1413685 |
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| End bp | 1414719 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769687 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001306644 |
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| Protein GI | 150021290 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000474551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTAG ACTTTTTACA AGCTTTAGAA CAACTTGAGG AAGAAAAAGG TATAAAAGTT
GATGAAATAA TTCCCATTAT TGAAAAAGCA TTAGTAAGTG CTTACAAAAA AGATTTTGGC
GGTGAAAAAA ACGTCGAAAT TACTATTAAT AGGCAAACAG GTGAAATTGA ACTTTATCAA
CTTTTAGAAG TAGTTGATAA AGTAGAAAAA GAAACAACAC AGATTTCATT AGAAGATGCA
TTAAAGATAA GCTCTAATGC AAAAATTGGG GATACTATAA GAAAAAGAAT CAACGTTAAA
AAATTCGGAA GAATTGCAGC ACAAACAGCA AAACAAGTAT TAATTCAAAG AATTAGAGAG
ATCGAAAAAG AAAAACAATT TGAAAAATAC TCTGAACTTG CTGGAAAAAT TACAACAGCT
GAAGTTATTA GAATAACAAA AGAATGGGCT GATATAAGAA TTGGAAAATT AGAGACTCGA
CTCCCAAAAA AAGAATGGAT TCCTGGTGAA ACCATAGAGC CCGCGTCACT TATAAAAGTT
TATGTAAAAG ACGTAAAAAA AGATAAAAAA GGTCCAAAAA TACTTGTAAC AAGGATAAAT
GAAGAGTTTA TAAAAGGCCT TTTAGAACTT GAAGTGCCTG AGATAGAGTC TAAAGTAGTT
GAGATAGTAA AAATTGTTAG AGAACCAGGT ATAAGAACAA AAGTGGCTGT AAAATCAAAC
AACCCAAAAG TGGATCCTGT AGGTGCGTGT ATTGGAGAAG AAGGTGTGAG AATAGCTGCA
ATACTAAGAG AACTAAAAGG CGAAAAGCTA GATATTATAA AGTGGTCAGA CGATCCAAAA
GAATTAATTG CTAGTGCTCT TCAGCCTGCA AATGTTGTTG AAGTTGAAAT TCTCGATCCA
GAAAATAAGG CATCAAGGAT AATTGTACCT CCTACCCAAT TATCTCTTGC TATTGGAAAA
GGCGGACAAA ATGCAAGGCT TGCAGCAAAA TTAACTGGTT GGAAAATTGA CATAAAACCT
TTAATGAATG TATAA
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| Protein sequence | MNLDFLQALE QLEEEKGIKV DEIIPIIEKA LVSAYKKDFG GEKNVEITIN RQTGEIELYQ
LLEVVDKVEK ETTQISLEDA LKISSNAKIG DTIRKRINVK KFGRIAAQTA KQVLIQRIRE
IEKEKQFEKY SELAGKITTA EVIRITKEWA DIRIGKLETR LPKKEWIPGE TIEPASLIKV
YVKDVKKDKK GPKILVTRIN EEFIKGLLEL EVPEIESKVV EIVKIVREPG IRTKVAVKSN
NPKVDPVGAC IGEEGVRIAA ILRELKGEKL DIIKWSDDPK ELIASALQPA NVVEVEILDP
ENKASRIIVP PTQLSLAIGK GGQNARLAAK LTGWKIDIKP LMNV
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