Gene Tmel_1405 details

Gene Information

• Locus tag: Tmel_1405
• ID: 5298376
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1407487
• End bp: 1408113
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640769680
• Product: hypothetical protein
• Protein accession: YP_001306637
• Protein GI: 150021283

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.179835
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAGGA TCGATGCTTT AAAATTTTTT CGGCCAACTC CTGAGTATAG AAAGCTTTTG 
ATTTTGGAAG CACTAAAAGA AAATAGTGAT ATTTCTCAAA AAGATTTATC TGTGATTGTA 
GGAATAGTGC CTTCACTGAT AAATAAGTAT CTAAATGAAT TTAAAGAACT GGGTTTAATT 
AAAGTGGAAT CCCAAGGGAG AAAAATAAGA TATATTTTAA CAGATGAAGG TGTTTCCGAG 
CTCTATTATT TAAAATTATC ATTTTTTAAC GATGTTGTTT CCTTGTCTAT AAAAATTGAA 
TCACATCTTG AAAATATACT ATTAAAGTTA AAATCAAAGA AAAATATAGG TATTTACGGT 
GCGGGATTGG TTGGAAGAGC ATTGGCGCAA TTGCTATTAA ACAGGGGATT TAATGTTGTT 
GTTTTTTTTG ATGATGATGA AAAAAAGATA GGTGATAGGT ACTTAGGGAT TCCCATAGTA 
AACATAGCTT CTAAGGCGGG GGTTGATGCA TTGATTGTTG CATCTATTAA AAATTCTGAA 
AAAATGGTAA AAATTGCAAA AAATTTTCAT TATAGTGATA TTTATCTTTT TAATACGGAG 
GAATTCAAAA TAAAATGGCA TGGATAA 

 

Protein sequence

MIRIDALKFF RPTPEYRKLL ILEALKENSD ISQKDLSVIV GIVPSLINKY LNEFKELGLI 
KVESQGRKIR YILTDEGVSE LYYLKLSFFN DVVSLSIKIE SHLENILLKL KSKKNIGIYG 
AGLVGRALAQ LLLNRGFNVV VFFDDDEKKI GDRYLGIPIV NIASKAGVDA LIVASIKNSE 
KMVKIAKNFH YSDIYLFNTE EFKIKWHG