Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1402 |
Symbol | |
ID | 5298024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1404489 |
End bp | 1405340 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640769677 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_001306634 |
Protein GI | 150021280 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.21791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA TAGGAGCCCA CATGCCAATT AGTGGAGGTT TTAAAAGAGT ACCAAAAGAA ACACACGAAA TTGGCGGGAA TGCTTTTCAA ATTTTTCCAC ATAATCCAAG ACAATGGAAG GCAAAACTTC CAAAAGATGA TGATGTGGAA ATATTCAAAA AAAGGGTAAA AGAATATAAT TTAACAGAAG ACTCTATGCT CTGTCACAGC GGCTATCTTA TAAACATAGC AAGTCCCAAA GAAGAAATCT GGCAAAAATC GCTTGAACTT CTAATTCTTG AAATGAATAT CTGCAAAACA TTGGGAATAA GATATTTAAA TATACACCCT GGAAGCCATT TAAACAGTGG CGTGGAAAAG GGAATAAATC AGATAGTAAA AGCTCTAAAT ATTGCTATGG AAAAAGAAAA AGAAACCTTT ATTCTCTTGG AAAACGTAAC AAAAAAAGGT GGAAACATCG GTTCAACCTT AGAAGAATTA AAAATGATAA TAGAAATGGT AAAATATCCA GAAAGGATAG GAATAACAAT AGATACTTGC CATGCATTTG ATGCAGGATA TGATATAACC AATAAAGAAA AGCTGGATAA ATTTCTCAAA ATGATTGACA AATTATTTTC ACTTGAAAAG TTAAAATTCA TTCATCTGAA TGATTCAAAA AATGAACTGG GTTCAAATAA AGATAGACAT GAAAATATAG GAAAAGGAAA AATAGGAGTT AAAGGTTTAA AAACATTCTT AACAAATGAA ACTATCCAAA AAATCCCATG GATTTTAGAA ACCCCAGGAG ATAATGAGGT ACATAAAAAT GATATTAAAG AGGTATTTAA CATCTTAGGA GTGAAACAAT GA
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Protein sequence | MIKIGAHMPI SGGFKRVPKE THEIGGNAFQ IFPHNPRQWK AKLPKDDDVE IFKKRVKEYN LTEDSMLCHS GYLINIASPK EEIWQKSLEL LILEMNICKT LGIRYLNIHP GSHLNSGVEK GINQIVKALN IAMEKEKETF ILLENVTKKG GNIGSTLEEL KMIIEMVKYP ERIGITIDTC HAFDAGYDIT NKEKLDKFLK MIDKLFSLEK LKFIHLNDSK NELGSNKDRH ENIGKGKIGV KGLKTFLTNE TIQKIPWILE TPGDNEVHKN DIKEVFNILG VKQ
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