| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1398 |
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| Symbol | miaA |
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| ID | 5298325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1401460 |
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| End bp | 1402365 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640769673 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001306630 |
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| Protein GI | 150021276 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.875628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACA CGATAATTTC AGGTCCAACC GCTGTTGGGA AGACTGATTT GATAATAGAA
ATCTCTACTA AAATTGGTGC TCAAATTATC TCCCTTGACT CTAGACAAAT ATATAAGTTA
ATGGATATTG GAACTGCAAA ACCTACTAAA GAAGAACAAC AAAAAGTTAA ACATCACCTA
ATTGATCACA TCTACCCAGA TGAATATTAC AATGCATTTT ATTTTAGGCA AGATGCACTT
AAACTAAGAA AGCAACTAAC AAAAAAAGGA ATCATACCAT TGTTTGTTGG AGGAACAGGT
CTCTATATTG ATGCTTTGGT CAAGGGTTTT TTCGAGGGAG CTCCAAAAGA TGAAAATATA
AGGAAACATT TAAATAAACT TGAAAAAAAA GAACCTGGGA CTTTAAGAAC CATGCTCCAA
AAATACGACC CAGAATATGC ATTGAAAATT CATCCATCAG ATATGAAAAG AACCATTAGA
GCTTTGGAAG TCTTTTTTAA AACAGGCAAA AAAATATCAG AACTTCAATC TCAAACTAAA
ATATCTAACA AATACAAAAT TATTGTTCTA ACACGCAATA GACAAGAGTT ATACGAAAGG
ATAAATACAC GTGTCGAAAA AATGATAAAA GCGGGATTAA TTGACGAAGT TGAAAAGTTG
TTAGAGCTTT ATCCAAAAGA TATTAACGCA TTTCAAACGA TTGGTTACAA AGAGCTTATA
CATTATTTTG AAAACAAATA TGACTTAAAA ACTGCTATAC ATCTAATAAA AAGAAACACA
AGGCATTTTG CAAGGAGACA ATTGATATGG TTAAGAAGAT ACAAAAATGC CATCTGGATA
AACCTTTCAG AAATATCTAG AAGGGAAACT ATTGAAAAAA TAGAAAAAAT CATAAATGAG
GTGTAA
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| Protein sequence | MKYTIISGPT AVGKTDLIIE ISTKIGAQII SLDSRQIYKL MDIGTAKPTK EEQQKVKHHL
IDHIYPDEYY NAFYFRQDAL KLRKQLTKKG IIPLFVGGTG LYIDALVKGF FEGAPKDENI
RKHLNKLEKK EPGTLRTMLQ KYDPEYALKI HPSDMKRTIR ALEVFFKTGK KISELQSQTK
ISNKYKIIVL TRNRQELYER INTRVEKMIK AGLIDEVEKL LELYPKDINA FQTIGYKELI
HYFENKYDLK TAIHLIKRNT RHFARRQLIW LRRYKNAIWI NLSEISRRET IEKIEKIINE
V
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