Gene Tmel_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1397 
Symbol 
ID5298340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1400075 
End bp1401457 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content29% 
IMG OID640769672 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001306629 
Protein GI150021275 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.610857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAC TTTATAGAAA ATATAGACCA AAAAAATTCT TAGAATTAGT GGGACAATCT 
CATGTAAAAA AACTCTTTGT AAATTCGTTA AAAAACAAAG AAATTTCCCA TGCATATATA
TTTGCAGGCC CTAGGGGTAC TGGTAAAACA ACTGTTGCAA GAATATTAGC AAAATCGCTA
AACTGTGAAA ACCCTCAAGA GATTGAACCA TGCAACATGT GTAATGCGTG TATTTCAATT
GATAAAGGAA ATTTTATGGA TGTATTGGAA TTAGATGCAG CTTCAAACAG GGGTATCGAC
GAGATTAGAA AAATAAGGGA AACTGTAAAT TACCATACAG CACAAGGAAA ATACAAGGTA
TATATAATAG ATGAAGCACA CATGCTTACA AAAGAAGCAT TTAACGCTTT GTTAAAAACG
TTGGAAGAAC CACCGTCAAA TGTTGTTTTT ATTCTTGCCA CTACAAATCC TGAGAAAATA
CCACAGACAA TAATCTCAAG ATGTCAGGTT ATTGACTTTA AAAACATTTC AAATAAAGAC
ATAATAAAAA GGCTGGAATT TGTATGTGAA AATGAAGGAA TTAAGATCTC TCATGAAGCC
ATTGTGGAAA TTTCAAAAAG AGCTAATGGC GGCCTTAGGG ATGCTTTAAC TATACTTGAG
CAAGTTATAA ACTCGGCGGG AAAAGACATT AAAATAGAAG ATGTAAGGGA AACTTTAGGA
CTAATACCAG ATACGATAAT TGAAAAATTA TTGGAAAATC TTGAAAACAA TGATATTAAA
AGCACTCTAA AATTAATAGA TGAGGTCTAT TACAGTGGAA AAAACTTAGA AATTTTTCTA
TATCAAACAA TTGAAAAATT AATATCACTA GTTGAGGAAA ACAACCACAA TTATATCCAT
TTTCTAAAAC CAATTTCTGA AATCTTAAAA GATATTAAAT ATTCAGAAGA AAAAATCACT
TTAGTAAAGC TTGGATTTAT AAGCCTTTTT GCAACACAAC CAATATATAT CCAGCCTAAA
AACAAAGAAA TTTCTCAAAA TGATTCCAAA AACGCAGAAA GAAAGGCTGA AAAAATTGAA
GAAAAAAATT TCCAGAAACT TTTAGAAGAA TTAAAATTGA AAGGTGATCT TTCACTTTTT
GTTGGACTTT CTTTTGCAAA TATCTTTGAA GATGATGAAA AGATAAAAAT TACATTTCCA
GATAATAGGA AATTACATTA TGAAATTATC AAAGAAAAAA AGGGAGAAAT TGAAAAGCTC
TACTACGAAA AATTTGGCAA AAGAAAAAAT ATAGAAATTA GTATTTCTGA ATCTCAAGGA
GATGATGTAC TAGAAAAATT AAAAACACTA TTTGGTGAAC AATTTAAAAT AGAGGAGGAT
TAA
 
Protein sequence
METLYRKYRP KKFLELVGQS HVKKLFVNSL KNKEISHAYI FAGPRGTGKT TVARILAKSL 
NCENPQEIEP CNMCNACISI DKGNFMDVLE LDAASNRGID EIRKIRETVN YHTAQGKYKV
YIIDEAHMLT KEAFNALLKT LEEPPSNVVF ILATTNPEKI PQTIISRCQV IDFKNISNKD
IIKRLEFVCE NEGIKISHEA IVEISKRANG GLRDALTILE QVINSAGKDI KIEDVRETLG
LIPDTIIEKL LENLENNDIK STLKLIDEVY YSGKNLEIFL YQTIEKLISL VEENNHNYIH
FLKPISEILK DIKYSEEKIT LVKLGFISLF ATQPIYIQPK NKEISQNDSK NAERKAEKIE
EKNFQKLLEE LKLKGDLSLF VGLSFANIFE DDEKIKITFP DNRKLHYEII KEKKGEIEKL
YYEKFGKRKN IEISISESQG DDVLEKLKTL FGEQFKIEED