Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1397 |
Symbol | |
ID | 5298340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1400075 |
End bp | 1401457 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640769672 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_001306629 |
Protein GI | 150021275 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.610857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAC TTTATAGAAA ATATAGACCA AAAAAATTCT TAGAATTAGT GGGACAATCT CATGTAAAAA AACTCTTTGT AAATTCGTTA AAAAACAAAG AAATTTCCCA TGCATATATA TTTGCAGGCC CTAGGGGTAC TGGTAAAACA ACTGTTGCAA GAATATTAGC AAAATCGCTA AACTGTGAAA ACCCTCAAGA GATTGAACCA TGCAACATGT GTAATGCGTG TATTTCAATT GATAAAGGAA ATTTTATGGA TGTATTGGAA TTAGATGCAG CTTCAAACAG GGGTATCGAC GAGATTAGAA AAATAAGGGA AACTGTAAAT TACCATACAG CACAAGGAAA ATACAAGGTA TATATAATAG ATGAAGCACA CATGCTTACA AAAGAAGCAT TTAACGCTTT GTTAAAAACG TTGGAAGAAC CACCGTCAAA TGTTGTTTTT ATTCTTGCCA CTACAAATCC TGAGAAAATA CCACAGACAA TAATCTCAAG ATGTCAGGTT ATTGACTTTA AAAACATTTC AAATAAAGAC ATAATAAAAA GGCTGGAATT TGTATGTGAA AATGAAGGAA TTAAGATCTC TCATGAAGCC ATTGTGGAAA TTTCAAAAAG AGCTAATGGC GGCCTTAGGG ATGCTTTAAC TATACTTGAG CAAGTTATAA ACTCGGCGGG AAAAGACATT AAAATAGAAG ATGTAAGGGA AACTTTAGGA CTAATACCAG ATACGATAAT TGAAAAATTA TTGGAAAATC TTGAAAACAA TGATATTAAA AGCACTCTAA AATTAATAGA TGAGGTCTAT TACAGTGGAA AAAACTTAGA AATTTTTCTA TATCAAACAA TTGAAAAATT AATATCACTA GTTGAGGAAA ACAACCACAA TTATATCCAT TTTCTAAAAC CAATTTCTGA AATCTTAAAA GATATTAAAT ATTCAGAAGA AAAAATCACT TTAGTAAAGC TTGGATTTAT AAGCCTTTTT GCAACACAAC CAATATATAT CCAGCCTAAA AACAAAGAAA TTTCTCAAAA TGATTCCAAA AACGCAGAAA GAAAGGCTGA AAAAATTGAA GAAAAAAATT TCCAGAAACT TTTAGAAGAA TTAAAATTGA AAGGTGATCT TTCACTTTTT GTTGGACTTT CTTTTGCAAA TATCTTTGAA GATGATGAAA AGATAAAAAT TACATTTCCA GATAATAGGA AATTACATTA TGAAATTATC AAAGAAAAAA AGGGAGAAAT TGAAAAGCTC TACTACGAAA AATTTGGCAA AAGAAAAAAT ATAGAAATTA GTATTTCTGA ATCTCAAGGA GATGATGTAC TAGAAAAATT AAAAACACTA TTTGGTGAAC AATTTAAAAT AGAGGAGGAT TAA
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Protein sequence | METLYRKYRP KKFLELVGQS HVKKLFVNSL KNKEISHAYI FAGPRGTGKT TVARILAKSL NCENPQEIEP CNMCNACISI DKGNFMDVLE LDAASNRGID EIRKIRETVN YHTAQGKYKV YIIDEAHMLT KEAFNALLKT LEEPPSNVVF ILATTNPEKI PQTIISRCQV IDFKNISNKD IIKRLEFVCE NEGIKISHEA IVEISKRANG GLRDALTILE QVINSAGKDI KIEDVRETLG LIPDTIIEKL LENLENNDIK STLKLIDEVY YSGKNLEIFL YQTIEKLISL VEENNHNYIH FLKPISEILK DIKYSEEKIT LVKLGFISLF ATQPIYIQPK NKEISQNDSK NAERKAEKIE EKNFQKLLEE LKLKGDLSLF VGLSFANIFE DDEKIKITFP DNRKLHYEII KEKKGEIEKL YYEKFGKRKN IEISISESQG DDVLEKLKTL FGEQFKIEED
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