| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1396 |
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| Symbol | |
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| ID | 5298339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1399006 |
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| End bp | 1400073 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769671 |
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| Product | twitching motility protein |
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| Protein accession | YP_001306628 |
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| Protein GI | 150021274 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGGAT TAAATTTAGA AGAAATTATC TTAAGGGGGA AAAAACTAAG AGCTTCTGAT
ATCCATATTA CATCGGATTT TCCTATCATG GTAAGAGTGG ATGGAAATTT AGTTTCACTA
AAGGATTTTC CAATACCAAC AGAACAAGAT ATTAAAAATA CCGTGGAACA ACTTTTTTCA
GACCTTGGAA TATCTCATGG AAAAAAAGAA ATAGATTTTT CATTTTCCAT GCACGATTTA
AGAATAAGGG CAAACTATTA CTTTGAAAGA AAAAAGCCTA CACTTGCACT AAGACTTATT
ACTAAAAAAA TAAGAACAAT TGATGAACTG GGGTTACCAC AAATTTTAAA AGAATTTGCA
GAAAAAGACC ATGGACTCAT ATTAGTTGCA GGTCCCACTG GAAGCGGAAA ATCCACAACT
TTAGCAGCAA TGGTTGAACA TATAAATTCA AGATTTGCAA GCCATATAAT AACCATTGAA
GATCCAATTG AATACGTTTT TGAATCAAAA AGATCTTTAA TACACCAAAG AGAAGTAGGA
ACCGATACTG AAAGTTTTTA CAATGGTTTA AAATATGCCT TAAGACAAGA TCCAGATGTA
ATATTAGTTG GTGAAATGAG GGATTTAGAA ACAATTTCTT TAACCCTTAC CGCAGCAGAA
ACAGGTCATT TAGTATTTGC TACAATACAC ACAAATTCAG CTGCCGCTGC ACCTGAAAGA
ATTATTGATG TTTTTCCAGC ATATCAACAA AAACAAATAG CTTTGCAACT TGCAAATACA
TTAATTGCCG TTATATTCCA AAGACTAGTT CCAAAAAAAG ATTTTGGTGT TTTAGCAATC
GATGAAATAA TGATTGCAAC ATCGGCCATC AAGAATTTAA TTAGAGAAAA TAAATTACAT
CAAATAGAAG GTATAATGCA AACAAGTCAA AAACAAGGAA ATATATTATT TGATGATGCA
TTAATTAACG CATATCTAAA TGGTTACATC ACAAAAGAAA CTGTATTTGA AAATGCTAGA
AACGTCGAGG AGGTGTCTAA AAAGATAGGA TGGAGAACAT TGAGATAG
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| Protein sequence | MLGLNLEEII LRGKKLRASD IHITSDFPIM VRVDGNLVSL KDFPIPTEQD IKNTVEQLFS
DLGISHGKKE IDFSFSMHDL RIRANYYFER KKPTLALRLI TKKIRTIDEL GLPQILKEFA
EKDHGLILVA GPTGSGKSTT LAAMVEHINS RFASHIITIE DPIEYVFESK RSLIHQREVG
TDTESFYNGL KYALRQDPDV ILVGEMRDLE TISLTLTAAE TGHLVFATIH TNSAAAAPER
IIDVFPAYQQ KQIALQLANT LIAVIFQRLV PKKDFGVLAI DEIMIATSAI KNLIRENKLH
QIEGIMQTSQ KQGNILFDDA LINAYLNGYI TKETVFENAR NVEEVSKKIG WRTLR
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