| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1393 |
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| Symbol | rho |
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| ID | 5298452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1396049 |
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| End bp | 1397320 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769668 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001306625 |
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| Protein GI | 150021271 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.107129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAACGTTG AAACTTTCAA CATTAAAGAC TTGGAAAAGA AAACAATAAA AGAGTTGTAC
AAGCTTGCAA AAGAATATGA TATAGCCAGA TATACTTCTA TGAGAAAGCA AGATTTAATA
TTTGCCATAC TTGAAGCTAG AGCTCAATCA GAAGGCTATT TCTTTGGTGA GGGTGTGTTA
GAAGTTCATC CAGATGGATT TGGTTTTTTG CGAAATATGG AAAGTATGTT ACCAAGCTCA
AAAGATATTT ACATCTCAAA TTCTCAAATA AGAAAATTCA ATCTTAACAC CGGTGACATT
ATATCTGGAG TTATTCGTCC TCCAAAAGAA GGAGAAAGAT TTTTTGCTAT GATAAAAATT
GAAGCAATTA ACTATAAAGA CCCCGAACTT GCAAACGAAA GAGTTAACTT TGAAAATCTT
ACTCCTTGTT ATCCGGATAC CCGATATATA CTTGAAACTG ATACTAATAC CTTATCAACG
AGAATTATAG ATTTGTTCTC ACCTATTGGC AAAGGACAAA GAGGCATGAT CGTAGCACCA
CCAAAAGCTG GAAAAACAAC TATTTTAAAG GAAATAGCAA ATGGTATAGC AAAAAATTAT
CCTGATACCG TTAGAATAGT ACTTCTAATT GATGAAAGAC CAGAAGAAGT AACCGATATC
AAAGAATCTG TAGATGCAAA GGTTATAGCC GCACCATTTG ACATGCCACC AGATAAACAA
ATTAAAAAAG CAGAGTTAAC ACTTGAAATG GCAAAAAGAC TTGTAGAGTA CGGACATGAT
GTCGTAATAC TCTTAGACAG TTTAACTAGA CTTGCAAGAG TTTACAATAT TAACGTACCT
CCAAGTGGTA AATTACTAAG TGGTGGCGTT GATCCTGCAG CTTTGTATAA ACCAAAACAC
TTTTTTGGTG CAGCAAGAAA TATCAAAGAA GGTGGTAGTT TAACAATTAT CGCAACTTCT
TTAATTGAAA CTGGGTCTAA AATGGATGAG GTAATATTTG AAGAATTTAA AGGAACAGGA
AACATGGAGC TTGTTCTTTC AAGGCAACTT GCAAATAAAA GAATATTTCC TGCTATTAAC
ATTACATTAT CTGGCACAAG AAAAGAAGAA CTTTTATTTT CACCTGAAAA CATGAAAAAA
ATCTGGCTTT TGAGAAAAAT GCTATCTTCT ATGGATGAAG AAGAAGGATT GCGATTGATT
ATCACCAAAT TAAAAGAAAC AAAATCAAAT GACGATTTTT TAGCACTAAT AGATTCCCAG
AAAGGAAGTT AA
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| Protein sequence | MNVETFNIKD LEKKTIKELY KLAKEYDIAR YTSMRKQDLI FAILEARAQS EGYFFGEGVL
EVHPDGFGFL RNMESMLPSS KDIYISNSQI RKFNLNTGDI ISGVIRPPKE GERFFAMIKI
EAINYKDPEL ANERVNFENL TPCYPDTRYI LETDTNTLST RIIDLFSPIG KGQRGMIVAP
PKAGKTTILK EIANGIAKNY PDTVRIVLLI DERPEEVTDI KESVDAKVIA APFDMPPDKQ
IKKAELTLEM AKRLVEYGHD VVILLDSLTR LARVYNINVP PSGKLLSGGV DPAALYKPKH
FFGAARNIKE GGSLTIIATS LIETGSKMDE VIFEEFKGTG NMELVLSRQL ANKRIFPAIN
ITLSGTRKEE LLFSPENMKK IWLLRKMLSS MDEEEGLRLI ITKLKETKSN DDFLALIDSQ
KGS
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