Gene Tmel_1389 details

Gene Information

• Locus tag: Tmel_1389
• ID: 5297557
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 1393428
• End bp: 1393895
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 23%
• IMG OID: 640769664
• Product: HAD superfamily hydrolase-like protein
• Protein accession: YP_001306621
• Protein GI: 150021267
• COG category: [R] General function prediction only
• COG ID: [COG2179] Predicted hydrolase of the HAD superfamily
• TIGRFAM ID: [TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00979107
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTG TAAAAAAAGT CTCAGACATT GATTTTAAAA AACTCATTGA TAAAGGATAC 
AATTTTTTTA TTTTTGACTT TGACAATACG ATAAATCTTT GGAAAAAAGA AGAAATTCCA 
GAAGAGATAG CTAAAATTTT TAAGTTTTTA TTTCAAAACA ATTCAAAGAT TCTTATTGTC 
TCTAATGGGA AACCAAGAAT ACTCAATTTT TCTGTTGAGA CTTTATGGCT TGCTAAAAAA 
CCTTTACCAT TTAAATTCTT AAGGTATATA CATAAAAAAT ATGGTAATAT GAAATTTAAC 
TTTGTAATAA TAGGAGATCA GCTTTTTACA GATATGTTAT TTGGTGTTTT TATTAATGCA 
TATAGAATAA AAATAGAACC TATTGATACT TCTCATGAGT TCTTTATAAC TAAAATACTT 
AGAAAATTTG AAAAAATACT CTTGAAATTT CTCAAACATA TGATATAA 

 

Protein sequence

MEIVKKVSDI DFKKLIDKGY NFFIFDFDNT INLWKKEEIP EEIAKIFKFL FQNNSKILIV 
SNGKPRILNF SVETLWLAKK PLPFKFLRYI HKKYGNMKFN FVIIGDQLFT DMLFGVFINA 
YRIKIEPIDT SHEFFITKIL RKFEKILLKF LKHMI