| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1388 |
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| Symbol | |
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| ID | 5298047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1391497 |
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| End bp | 1393125 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769662 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001306620 |
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| Protein GI | 150021266 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000497228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAA AAGAAAAGAT TAAAAAGAAA AACAATGAAA CTGAAAATAT AGATTTTGAG
GAAGTATATC TTTCAAGAGG TCAATTAATG TGGCGTGCTT TCAAGAAAAA TAAACTTGCA
ATGGTTGGTT TATGGACATT GATTGTGTTG TATATCATGA TGTTTGCAGC TGATTTTTTG
GCACCGTATA ACCCATTTGA TCAAAGCTTG AAACACTCCT ATGCACCTCC AACTAGTGTT
ACATCATTAT ACAAGGTGGG GGATTTTGAA AAAAAGGTAG GATTACATGT ATTGCCATAT
ACAAGCTATG TGGATAAATT GGATTTTACT CGAAAAACAA AAGAATTAAT TTTTCCAAGT
AGATTAACTG TTGAGTACAA AGGTGAACTT TTAACTTTGG TTATGAATGA TGCGAAATAT
TTGCCAAGAA AAAATTTTGA AGGAAAGGTA ATCAAAGTAA ATTCATTGGA GTTTACCTTA
AAAGTTGAAG ATTTTGCGTT TATAAATAAC GAATGGAAAA AGGCTTCATC CTCAAGCGAA
AAAACACGTT ACTTGGTGAA AGGTATAAAC GATGATATCT TAGCAAAAGG AGAAGCATTT
AATGAGAATG AAAGTGCAAC TGCAAAAAGT GTTTTATTTG GAAAGTATGG TTTTAGACTT
GGTATAGCAG ATGAAAGGGA AATTGATAAG GTAGGAATGA GATATACCAT AAATTATATA
AAGTATGAAG ATGAAAATGG GAAGAAACAT ATTTTATTTG GAAAAGATTT GAAGATAAGA
GATTATGATT ATAAATACTA TCCTGTAAAA TGGTTTGTAA AGAGTTGGGG ACCAAAGAAA
AAGGATTATG GTAGAGTAGG TTATATTTTA TGGATTATTC CGCTAAAATA TCATTTATAT
GGTGTTGATA ATTACGATAA TAATGAATTT GTAAGGTTAT ATATAATGGG TGGAGATCAA
TTTGGTAGAG ATGTATGGAC AAGGTTAATA TTTGCATCTA GAATTTCACT GTCAATTGGT
TTTATTGGAT TGGCAATTAC ATTAACACTC TCGTTATTCT TTGGTGGAAT AGCGGGATAT
TATGGTGGAA TTGCCGATGA ATTGTTAATG AGGTTTACTG AGATAATAAT GGCAATTCCG
GGATTTTATC TGTTAATATT ATTGAGATCA CTCTTACCAC TTGATATACC ATCATCACAA
GTTTATATTT TGCTTATATT TATACTTTCA TTTATTGGAT GGGCAGGACG TGCAAGGATA
ATAAGGGGTA TGGTATTGTC CATAAAGAGA AATGAATTTG TTGAAGCGGC GTATGCATTG
GGATATCCAG ATAGAAAAAT CCTTTGGAGG CATGTTATTC CAAATACAAT GACATATATG
ATAGTTACAT CAACATTAGC AATTCCAGGA TATATTTTAG GTGAAGCAGG ATTATCATTC
TTGGGACTTG GAATTAGAGA GCCTTCTGCA TCTTGGGGAT TAATGATGGC TAGAGCTCAA
GATATTTACG TTTTGCAGAG TGCACCATGG TTATTGATCC CAGGTATCTT TATATTTGTA
ACAGTTTTGG CATTTAATTT TGTAGGTGAC GGATTAAGAG ATGCATTTGA TCCAAGGGCA
TTAGGATAA
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| Protein sequence | MAKKEKIKKK NNETENIDFE EVYLSRGQLM WRAFKKNKLA MVGLWTLIVL YIMMFAADFL
APYNPFDQSL KHSYAPPTSV TSLYKVGDFE KKVGLHVLPY TSYVDKLDFT RKTKELIFPS
RLTVEYKGEL LTLVMNDAKY LPRKNFEGKV IKVNSLEFTL KVEDFAFINN EWKKASSSSE
KTRYLVKGIN DDILAKGEAF NENESATAKS VLFGKYGFRL GIADEREIDK VGMRYTINYI
KYEDENGKKH ILFGKDLKIR DYDYKYYPVK WFVKSWGPKK KDYGRVGYIL WIIPLKYHLY
GVDNYDNNEF VRLYIMGGDQ FGRDVWTRLI FASRISLSIG FIGLAITLTL SLFFGGIAGY
YGGIADELLM RFTEIIMAIP GFYLLILLRS LLPLDIPSSQ VYILLIFILS FIGWAGRARI
IRGMVLSIKR NEFVEAAYAL GYPDRKILWR HVIPNTMTYM IVTSTLAIPG YILGEAGLSF
LGLGIREPSA SWGLMMARAQ DIYVLQSAPW LLIPGIFIFV TVLAFNFVGD GLRDAFDPRA
LG
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