| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1386 |
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| Symbol | |
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| ID | 5298262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1388719 |
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| End bp | 1390455 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640769660 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001306618 |
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| Protein GI | 150021264 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.37673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC TTGCCGTATT TTTGGTTGTA CTTGCAGTGG TATTATCTTT TGCTGCTCAA
CTTCCATATA TTGGGGCAGA TGCTAACGGT AAACCAGGTG GTCAGTTTGT GTTGGGAACA
TTAAGTGGTC CAAAAACTGT AAATGATGTG GCTGCTAAAG AAACTAGTTC TACCGATGTT
ATTGATATGT TTATGGGATA TGGAGGTACA TTGATTGAAA GACATGGTGT AGATATGAAG
TTCTATCCTG CTATTGCTGA AAACTGGGAA GGTCCAAGGC TTACAGCAGA TGGTGGTATG
GAAATTATTT GGCACATTAG AAAAGGTGTA AAGTTCAGTG ATGGTAACCC TTTAACAGCA
GATGATGTAG TATTTACTTT AAATGATATT TATACAAATC CAGATATTCC AAGTTCTATG
CAAGATATTT TAAAGAGTAC AAATGGATAT TTACCAAAGG CCGAAAAAAT TGACGATTAC
ACAGTAAGGA TGTACTACCC AGAACCATTT AGACTTGCGT TTAGATATTT AGGTGGGATG
TATATATTCC CAAAACATAT TGCTGAAGAA TACGTTAAAA ACGGTACATT CCAGGAATTT
TGGACAGTTG AAGCTATTAA CGAAGGGAAA ATTGTGGGGC TTGGTCCATA TATTCCTGTA
GAGTATGTTC CAGACCAATA CGTAAGGTTT GTAAAAAATC CATACTATTG GAAAAAAGAT
GCAAATGGCA ATCAACTACC ATATTTTGAT GAAGTAATTT ATAAAATTAT TTCCAATCAA
GATGCAATGA GACTTGCATT TGAAAATGGA GAAATTGATG TATATGTACC AAGAGGAACG
GAATTTGCAG AATTAAAAGA AAAAGAGAAG GAATTAAATA TCGTAGTTAC AACAGCAGGA
CCAGCTTATG GTACACTATT TATCACATTT AATTGGAATA CACCAGATCC GGTAAAAAGA
AAATGGTTTA GAAACGAATA TTTTAGAAAA GCTGTTGCAC ATGCTATAGA CAAACAATCA
ATTATCGATA CTCTTTACAA CGGTCTTGCA ATTCCACAAT GGTCACCAGT ATCAATGAGT
TCCCCATATT ACAATGAAGA TGTAGTAACA AAATATGAAT TCGATCTTGA CCTTGCAAGA
GCAATGCTTG AAATGGGCGG CTTTAGTTGG GACGAAAATG GACAACTTAT CGACGAAGAT
GGAAATCCAG TTAAATTCTT ACTTACAACA AATGCAGGGA ACAGAGTGAG AGAGGGTGCT
GCAAATATTA TTCAAGATGC TTTGAAGAAA CTTGGAATGG ATGTAACATT TACACCAATC
GATTTCAATA CTTTGGTACA AAAATTGTTG AATACAGGTG ATTGGGAGGC AGTAATTATT
GGTATAACTG GTAGTGATGA ACCACAAGGT GGAGCAAACA CATGGAAAAT TGACGGAGGA
TTACATTTCT GGAACTATTC ACCAGAAGTT GCAGAATATG TTGATGCAAA TGATTACTAC
TTGTCAGATT GGGAGCTTGA AATTGATAAG ATATTTAAAG AAAATGTAGC AATATTGGAT
GAAGATATTG TAAAAGACTA CTTTGCTAGA TTCCAACAAT TAGTATCCGA ACACTTACCA
TTAATTTACA CGGTTAATAC ATTGAGACTA TATGCTTACA AGGCAAACTT GAAAAATGTG
AAGATAGGTC CACTTGGTGG AATGACGTGG AACATTTATG AGGAATGGAA GAAATAA
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| Protein sequence | MKKLAVFLVV LAVVLSFAAQ LPYIGADANG KPGGQFVLGT LSGPKTVNDV AAKETSSTDV
IDMFMGYGGT LIERHGVDMK FYPAIAENWE GPRLTADGGM EIIWHIRKGV KFSDGNPLTA
DDVVFTLNDI YTNPDIPSSM QDILKSTNGY LPKAEKIDDY TVRMYYPEPF RLAFRYLGGM
YIFPKHIAEE YVKNGTFQEF WTVEAINEGK IVGLGPYIPV EYVPDQYVRF VKNPYYWKKD
ANGNQLPYFD EVIYKIISNQ DAMRLAFENG EIDVYVPRGT EFAELKEKEK ELNIVVTTAG
PAYGTLFITF NWNTPDPVKR KWFRNEYFRK AVAHAIDKQS IIDTLYNGLA IPQWSPVSMS
SPYYNEDVVT KYEFDLDLAR AMLEMGGFSW DENGQLIDED GNPVKFLLTT NAGNRVREGA
ANIIQDALKK LGMDVTFTPI DFNTLVQKLL NTGDWEAVII GITGSDEPQG GANTWKIDGG
LHFWNYSPEV AEYVDANDYY LSDWELEIDK IFKENVAILD EDIVKDYFAR FQQLVSEHLP
LIYTVNTLRL YAYKANLKNV KIGPLGGMTW NIYEEWKK
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