| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1385 |
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| Symbol | |
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| ID | 5298261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1387707 |
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| End bp | 1388714 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640769659 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001306617 |
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| Protein GI | 150021263 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.678935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAG CAGTAAAAAC TAATCCCATA ATAAAAATAC AGAATTTGAA AAAGTATTTT
CCAATTACAA AAGGATTTCT TGTAAAGAAA CACGTAGGGG ATGTTAAGGC GGTTGATGAT
GTATCTTTTG AAGTTCACAA AAAAGAAACG TTTGCCCTGG TTGGGGAATC TGGGTGTGGT
AAAACAACCA CAGCAAGAAC AATGTTGAGA TTAATAGATC CTACAAGTGG AAGAATAGAA
ATTTTTGGAA AGGATATTTC AAAACTTAGT AGAAAAGAAT TACTTCCATT CAGGAGGAAA
ATGCAAATAG TTTTCCAAAA TCCAATAGGT TCGTTGAATC CAAGGATGAC TATTGGTCAA
ATATTAACTG AACCGTTGTT GTTTCATAAA ATAGTGAAAG ATAAAAATGA AGCTTATGAT
AGAGCAGTTG AGGTATTGAG AATGGTCGGA TTAAAGCCGT ATCACATGGA TAGATATCCT
CACCAATTTA GTGGAGGACA AAAACAGAGA ATTGCGATTG CTAGGGCACT TTCTGTAGGA
CCAGAGATTT TGTTCTTGGA TGAACCAACT TCTGCTTTAG ATGTTTCTGT TCAGGCACAA
ATTATAAATC TATTTTTGAA ATTTCAAGAA GAGTTGAATT TAACTTATAT ATTTATTTCT
CACGACTTGT CTTTAGTTAG GTTTATTAGT GATAAAGTGG CGGTTATGTA TTTGGGTAGA
ATCGTTGAAA TTGGAGACGT AGATGAGGTA TTTGAAAATC CAATACATCC ATATACAAAA
GCTTTGTTGT CAGCATCACC AATTCCTGAT CCAAAGGTAG AAAAAAGTAG AAAGAAAATT
ATATTAAGTG GAAATGTTCC GAGTCCAATT GCAAGGCCAA GTGGTTGTTT CTTCCATCCA
AGATGTCCGT ATAAGACGGA AAAGTGTGAA AAAGAATATC CAAAGATGTA TAAAGTTTCT
GAAAATCACC AGGTATCATG TTACCTGGTA GAAAAAGAGG GGGTGTGA
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| Protein sequence | MNEAVKTNPI IKIQNLKKYF PITKGFLVKK HVGDVKAVDD VSFEVHKKET FALVGESGCG
KTTTARTMLR LIDPTSGRIE IFGKDISKLS RKELLPFRRK MQIVFQNPIG SLNPRMTIGQ
ILTEPLLFHK IVKDKNEAYD RAVEVLRMVG LKPYHMDRYP HQFSGGQKQR IAIARALSVG
PEILFLDEPT SALDVSVQAQ IINLFLKFQE ELNLTYIFIS HDLSLVRFIS DKVAVMYLGR
IVEIGDVDEV FENPIHPYTK ALLSASPIPD PKVEKSRKKI ILSGNVPSPI ARPSGCFFHP
RCPYKTEKCE KEYPKMYKVS ENHQVSCYLV EKEGV
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