Gene Tmel_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1380 
Symbol 
ID5298092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1382790 
End bp1383023 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content28% 
IMG OID640769653 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001306612 
Protein GI150021258 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.278565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGATTGG ATAAATTTTT AAAGGAAAGT AGAATTATTA AACGTAGGAC AATTGCACAA 
CAAATTGCAA AAAATGGAAA AGTTTTTAGA AATGGATATG TACTTAAGCC TTCTTCTGAG
GTGAAGATGG GAGATATTTT GGATATTTTT TTGAAAAATA GGCATATTAA GGTTAAAGTT
TTAAGTGATA AAGAATATGA ATTAATAGAA GAAGAAAAGG GGGAGGATTT ATGA
 
Protein sequence
MRLDKFLKES RIIKRRTIAQ QIAKNGKVFR NGYVLKPSSE VKMGDILDIF LKNRHIKVKV 
LSDKEYELIE EEKGEDL