| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1354 |
|---|
| Symbol | |
|---|
| ID | 5298432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1360495 |
|---|
| End bp | 1361337 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640769628 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001306587 |
|---|
| Protein GI | 150021233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACAA ATAAAGATAA AGTAGTTAAA CTTTCAATAA TGGTTGAAGT GGCTCATCCA
GTAGTTAGAA TACCAGTTCT TGATGGGGAG GGTAATGCAC ATTATTTTCC AGGTGTTGGT
GGAATAACTT ATAATTTCGG ATTGGGCGAT AATGCATTTA AAATGCATGG AGATCATATT
GAACCAGATG TTTCTACTAA AAATAGTGAT GCTAAGCTTA ATGATACTTG TATGACTTTG
GCATGTATTG GAAATGAAGC GGAAGTTGTT TCTGGAGATG CAAAAGGCAT GAAAGGTTTT
GTTATTGGAA AACATGGAGG TGTAGATCAT ATCTTAGTAT ATTTTAAAGA AAAGGAAAAA
TTGAGAGTAG GAGATAAAAT TCAAATTAAA GCATGGGGCC AGGGGCTTGA ATTAACAGAT
TATCCTGAAG TAAGAATCTA TAATATCGAT CCGAAATTAT TTGAAAAAAT TCCAATTGAA
GAAAAAGATG GAAAACTAAT AGTCCCTGTT ACTGCAGAAA TTCCAGCCCA TTTAACTGGG
TCAGGAATAG GAGCCTCAAA TCCAGCAGAT ACAGATTACG ATATAAATAC ACATGACATG
GAAGAAATAA AAAGACTAGG AATTGATAAA ATAAAAATAG GAGATATAGT TGCAATAAAA
GATCATTACA GTGGTTTTGG GGTTGGTGGT TATAGGAAAG ATGCGGTGTC TATAGGTGTA
GTAGTACATT CAAATTGTGT TAAAACAGGT CATGGTCCAG GGGTTGTTGT AATTATGACT
TCTGCAAATG GAATAATAGA GCCAAAAAAA GTTTCTCAGA TGAATATAAA GGATTTTATT
TAA
|
|---|
| Protein sequence | MITNKDKVVK LSIMVEVAHP VVRIPVLDGE GNAHYFPGVG GITYNFGLGD NAFKMHGDHI
EPDVSTKNSD AKLNDTCMTL ACIGNEAEVV SGDAKGMKGF VIGKHGGVDH ILVYFKEKEK
LRVGDKIQIK AWGQGLELTD YPEVRIYNID PKLFEKIPIE EKDGKLIVPV TAEIPAHLTG
SGIGASNPAD TDYDINTHDM EEIKRLGIDK IKIGDIVAIK DHYSGFGVGG YRKDAVSIGV
VVHSNCVKTG HGPGVVVIMT SANGIIEPKK VSQMNIKDFI
|
|---|
| |