Gene Tmel_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1348 
Symbol 
ID5297958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1356635 
End bp1357342 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content28% 
IMG OID640769623 
Producthypothetical protein 
Protein accessionYP_001306582 
Protein GI150021228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.318729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGGCA TGACCATACA AATGGTGATA ATTGGTATTA TTTATCTAAT AACTTTTATT 
TTCTTAAGCT TTGTAGAAAA AATACTTTTA CCATTAGGAA ATATAGAACA TACACTTTCA 
ACTATTTTGT GGGGATTTCA TTTTGTTATA GGTGCTATTT CTGGAATGGC GTTTAGATTT 
ATTTATAACA AACTTAAAGA AAAAAATATA GCCAGAGAAA ATTATTTGAA TAACTTTTTA 
TTACAAAGAA TTGCAGGTAT TGTATTTGAC TTTATGGTTA TTGCTTCCAT AAGCGCAGTT 
GTACTTTCAA AAATTAAAGA CGAATTCTGG GGAATATTTA TAATTACATT TACCGCAGGC 
GTTTTAACAT ATTTCTTTAT AATGCCATTA ACTAAAAGAA TATTTAAAAG ATACGAAATT 
GAAAATAGGG TTGCATTTTA CGGAATGCTA ACATGTACCA TATCAACTGG TATAGCTCTG 
TTAAGAGAGG TAGATCCAAT ACTTGAAACG GGAGCAGCAA AAAACTTAGT CTGTGGTATT 
TCAATAGCTA TAGGTTTACC ACTAATTATC ATACTAAATC TTCCTGCTTT TTCTATTTCA 
ACAGGAAGAA ATATCTTTAA CTTTTTCGGG TTAATTTTAA TGCTAATATA TGGATTATTA 
TTCTTCATAA TTGGGAAAAC ATTCCTTAAA AAGTTAAATA ACAATTAA
 
Protein sequence
MDGMTIQMVI IGIIYLITFI FLSFVEKILL PLGNIEHTLS TILWGFHFVI GAISGMAFRF 
IYNKLKEKNI ARENYLNNFL LQRIAGIVFD FMVIASISAV VLSKIKDEFW GIFIITFTAG 
VLTYFFIMPL TKRIFKRYEI ENRVAFYGML TCTISTGIAL LREVDPILET GAAKNLVCGI 
SIAIGLPLII ILNLPAFSIS TGRNIFNFFG LILMLIYGLL FFIIGKTFLK KLNNN