Gene Tmel_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1338 
Symbol 
ID5297620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1346040 
End bp1346813 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content29% 
IMG OID640769613 
Producthypothetical protein 
Protein accessionYP_001306572 
Protein GI150021218 
COG category[R] General function prediction only 
COG ID[COG2992] Uncharacterized FlgJ-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAC TTATTTTCAT ATTAATAATT ATATCATTTT TAATTTTTGA CTTTTGGATT 
ATTTATTCGG AATTTGATTA TATTTCTTTT TTTAAAGAAG TGTCTCTTAG TTTTGAAAGT
TGGAAGGATT TAAAGGCATT TTTTGATGAG ATCGGGTATG ATTCACTGAA AAATCCTCCA
AAGGTTTATG TTACTTCCTT TCCTAAGGAT CTCAAAGATG CTCCTGTAGA TATTAGAAAA
GAACTTTTTG TTAAGATAAT GATACCTATA ATTAGAAAGG TTAACGAAGA AATACTTAGA
GAGAGAAAAG AAATTATTAC TGCTATGGAA AAAGGTGATA CTTTAACATT GAAAAAGTAT
TACAAGAAAT ATAATGCAAA ATCAAACGAA GAATTACTTT TAAAAGTAGA TGCTATTCCA
GAAGATATTG CTATTGCGCA AGCGGCTATT GAGTCGGCAT GGGGGACTAG TAAATTTGTC
GTTATTGCTA ATAATATATT TGGCGAATGG ACTTATGAAC CTGGTACTGG AATAATACCA
GATGAAAGAC CAGACGGCGA GATATATGAA ATAGAATATT TTAAAAATTT AGAAGATTCT
GTGAGAAGTT ATGCGATGAA TTTAAATAAA TTGCCATATT ATGAAAAATT TCGTCTTATT
AGAGCTGGTA TTGAAAAAGG CCATCCTGCA GATGGCCTGG TGTATTATTC ACAAATGAGA
GAAAAGTATG TGGAAATAGT AAAAAATGTT ATTAAACATC TTCCTGATTT ATAG
 
Protein sequence
MKKLIFILII ISFLIFDFWI IYSEFDYISF FKEVSLSFES WKDLKAFFDE IGYDSLKNPP 
KVYVTSFPKD LKDAPVDIRK ELFVKIMIPI IRKVNEEILR ERKEIITAME KGDTLTLKKY
YKKYNAKSNE ELLLKVDAIP EDIAIAQAAI ESAWGTSKFV VIANNIFGEW TYEPGTGIIP
DERPDGEIYE IEYFKNLEDS VRSYAMNLNK LPYYEKFRLI RAGIEKGHPA DGLVYYSQMR
EKYVEIVKNV IKHLPDL