| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1336 |
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| Symbol | trmE |
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| ID | 5297815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1343725 |
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| End bp | 1345050 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640769611 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001306570 |
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| Protein GI | 150021216 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTGATA CAATAGCAGC GGTTTCATCT CCTCATGGAA CAGGTGCAAT TGCGGTTATT
AGAATAGATG GGCCAAAAAG TCATGATATA GCGAAAAAGT TAACAGGGTT AAATAAGGTA
GAGTATCGTA GAGTGTATAC TACATATTTG AATTTTGAAG GAGATATTTT AGATCAGGTT
AATATAGTTT TTTTTAAATC GCCAAATAGC TATACAGGTA ATGATTTAAT TGAAATATAC
ACACACGGTG GTATTTTAGT AACACAAAAT GTTCTTGATG CAATTCTAAA GAGTGGGGCT
AGAATAGCAA AAAGAGGAGA ATTTACCAAA AGAGGATTTC TTAATGGGAA AATTTCACTT
GTGCAAGCAG AAGCTATTTA CCAAATTATA GAGGCAAAGA GTGAAGTATC TTTGAAAATG
TCATTACAAA ATTTGAAGGG AAAATTAGGT GAAGAAATAG AGTATTATCG CGGAGAGATA
TTAAACGTAT TGTCGGAAAT AGAAGTAACA TTTGATTATC CGGATGATAT AGAATTAGAT
GAAAAAAGCA TATTGAATCT GCTTTCAAAG TTAAAAGATG AGGTAGGTAG AAAGATTGAA
GATAGTAAAA AATCCATAAT GCTAAATAAT GGAATTGTTA TGACAATTGT TGGAAAACCT
AATTCCGGAA AGTCAACACT TTTAAACAGA CTTCTTTTGG AAGATAGAGC AATTGTAACT
GATATACCAG GAACAACACG GGATGTGATA AAAGGTGAAA TAGAAATTAA TGGTATTAGA
TTTGTAATTG TGGATACCGC TGGAATCAGA GAAACAAAAG ATGTAGTAGA AAAAATTGGT
ATAGAACGGA GTTTAAAAGA AATACAAAAG GCGGATGTAA TTCTTTTTGT TTTAGATGCA
ACTACTGGTT TTACAAAAGA AGATAAGCTA ATTTTGAGGA AAATTGAAGG TGGAAATTAT
ATACCTGTGT GGAATAAATG TGATGAAGGA AATAATTTTA ATAAGATATT TGATGGTGAA
ATAAAAATTA GTGCTCTTAA TGGAGAAGGT TTAAAGAATT TAGAGAATAA AATAGTATCT
AAGGTTAAAA ATATTATAGA AAGCGGAACG GCTTCTCACG TTATAACCCA GAGACAGGTT
GAAATATTGG AAAGGGTATA TACTCATCTG GAAAGTGCGG TAAATAACTT AAATATGGGA
TATGAAATAG ATTTAATATC TATTGATTTG AGGAGAGCAC TTGAAGAGTT AGATATGCTA
ATTGGAAGAA AATTTTCCGA TGATCTTTTG GATAACATAT TTTCAAACTT CTGTGTTGGA
AAATAA
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| Protein sequence | MFDTIAAVSS PHGTGAIAVI RIDGPKSHDI AKKLTGLNKV EYRRVYTTYL NFEGDILDQV
NIVFFKSPNS YTGNDLIEIY THGGILVTQN VLDAILKSGA RIAKRGEFTK RGFLNGKISL
VQAEAIYQII EAKSEVSLKM SLQNLKGKLG EEIEYYRGEI LNVLSEIEVT FDYPDDIELD
EKSILNLLSK LKDEVGRKIE DSKKSIMLNN GIVMTIVGKP NSGKSTLLNR LLLEDRAIVT
DIPGTTRDVI KGEIEINGIR FVIVDTAGIR ETKDVVEKIG IERSLKEIQK ADVILFVLDA
TTGFTKEDKL ILRKIEGGNY IPVWNKCDEG NNFNKIFDGE IKISALNGEG LKNLENKIVS
KVKNIIESGT ASHVITQRQV EILERVYTHL ESAVNNLNMG YEIDLISIDL RRALEELDML
IGRKFSDDLL DNIFSNFCVG K
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